Pairwise Alignments

Query, 869 a.a., DNA topoisomerase I from Pseudomonas putida KT2440

Subject, 865 a.a., DNA topoisomerase I from Klebsiella michiganensis M5al

 Score = 1159 bits (2997), Expect = 0.0
 Identities = 575/866 (66%), Positives = 683/866 (78%), Gaps = 9/866 (1%)

Query: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAGEA 60
           MGK+LVIVESPAKAKTINKYLGN YVVKSS+GHIRDLPTSGSAS       K   +    
Sbjct: 1   MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASK------KSADSTSTK 54

Query: 61  PALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR 120
            A  PK+  R  LV RMGVDP H W A YEILPGKEKV+ EL++LA+ AD IYLATDLDR
Sbjct: 55  GAKKPKKDERGALVNRMGVDPWHDWDAHYEILPGKEKVVSELKQLAEKADHIYLATDLDR 114

Query: 121 EGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV 180
           EGEAIAWHLRE IGGD+ RY RVVFNEITK AI++AF +PGEL+IDRVNAQQARRF+DRV
Sbjct: 115 EGEAIAWHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRV 174

Query: 181 VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAKV 240
           VGYMVSPLLW KIARGLSAGRVQSVAV+LVVEREREI+AF+PEEYWE+ A   T     +
Sbjct: 175 VGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASTTTPGGDAL 234

Query: 241 RFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAAS 300
             +V     + F+P++  + MAA+  L+ +SYSV++RED+PTSSKP APFITSTLQQAAS
Sbjct: 235 PLQVTHSGDKPFRPVSRDETMAAVALLEKASYSVLEREDKPTSSKPGAPFITSTLQQAAS 294

Query: 301 NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPLV 360
            RLGFGVKKTMMMAQRLYEAG+ITYMRTDSTNLS DAL+M R YI   FGK+YLPE+   
Sbjct: 295 TRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYIGDNFGKKYLPESANQ 354

Query: 361 YGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT 420
           Y SKE +QEAHEAIRPSDVN     L  ME DA++LY+LIWRQF+ACQM PAQY ST++T
Sbjct: 355 YASKENSQEAHEAIRPSDVNVLAETLKDMESDAQKLYQLIWRQFVACQMTPAQYDSTTLT 414

Query: 421 VAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKPP 480
           V AGDF+L+A+GR L+FDG+T+V+P   K  ED  LP + +GE+L L+++ P+QHFTKPP
Sbjct: 415 VKAGDFKLKARGRTLRFDGWTKVMPALRKGDEDRTLPLVNKGESLSLVELTPAQHFTKPP 474

Query: 481 ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF 540
           ARF+EASLVKE+EKRGIGRPSTYA+IISTIQDRGYV + NRRFY+EKMG+IVT+RL E+F
Sbjct: 475 ARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENF 534

Query: 541 SNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAES--SEDGMRANQPTM 598
            +LM+Y FTA ME+ LD VA  + +WK VLD F+GDF+ +LQTAE    E GM+ N   +
Sbjct: 535 RDLMNYDFTAQMEDRLDQVANHQAEWKQVLDNFFGDFTSQLQTAEKDPEEGGMQPNPMVL 594

Query: 599 TNIPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGE-SESR 657
           T I C  CGR M IRTASTGVFLGCSGY+L PKERCK T+NLVP +E+    EGE +E+ 
Sbjct: 595 TTIDCPTCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGEDAETN 654

Query: 658 VLLGKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGNYRIKGYEGPSLECDKC 717
            L  K RC  C TAMD+YL+D K KLH+CGNNP C GYEIEEG +RIKGY+GP +EC+KC
Sbjct: 655 ALRAKRRCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKC 714

Query: 718 GSEMQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRD 777
           GSEM LK GRFGK+  CTN  CKNTRK+L++GE APPK D V +PEL CEK D  +VLRD
Sbjct: 715 GSEMHLKMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRD 774

Query: 778 GASGLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRK 837
           GA+G+FLAA+ FPK+RETRAPLV E+   +  +  K  +L DAPQ+DP+G   ++R+SRK
Sbjct: 775 GAAGVFLAANTFPKSRETRAPLVEELYRFRDRLAEKLRYLADAPQQDPEGNKTMVRFSRK 834

Query: 838 TKEQYVQSEVDGKPTGWKAFYDGNAW 863
           TK+QYV SE +GK TGW AFY    W
Sbjct: 835 TKQQYVASEKEGKATGWSAFYIDGKW 860