Pairwise Alignments

Query, 313 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  148 bits (373), Expect = 4e-40
 Identities = 93/232 (40%), Positives = 124/232 (53%), Gaps = 2/232 (0%)

Query: 67  LVATLGAVVQLGLGARSIHLRPAELAERMLKVQEDERQHLGRELHDDIGQLLTAAKLQLQ 126
           L+  +    QL       + R   L++R+++VQE ER+ + R+LHDD+GQ LT  KL LQ
Sbjct: 444 LIRDVSQAEQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHLQ 503

Query: 127 WLQRRMP--DELQGHCDALRSTLDDTLGNVRDVSALLNPRQLASLGLEASLRAHLVRTLA 184
            L RR     E +     L +++D  L  VR +S  L+P QL +LGLEA++R HL   L 
Sbjct: 504 RLIRRQAGDSEFERLSQPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFLE 563

Query: 185 TSGVHWSLACNQRLGGIDEAVAMAVFRITQEAVTNMLRHAQAHNLVIRLQRTPEGLSLSI 244
            SG  W L        I    A+A FR+ QEAV N+ RHA+A  + I +      L L I
Sbjct: 564 ASGTCWELEVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLEI 623

Query: 245 QDDGRGFAPARHPAEAGQRGLAGMQERVIALQGSLDITSQPGRGTQIEAMFP 296
            DDGRGF        A   GL  M ERV +  G L I+S PG GT+I A+ P
Sbjct: 624 LDDGRGFDVPEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLP 675