Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

Subject, 217 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  221 bits (564), Expect = 6e-63
 Identities = 122/219 (55%), Positives = 152/219 (69%), Gaps = 2/219 (0%)

Query: 1   MTCRLLLVDDHSLIRAGVRALVCDIPGYDVVGEADDGNQLLDQVRTLAPDIILLDISMRS 60
           M+ R+ LVDDH+L+RAG+RALV D PGY+VV E  DG  +   +R   PDI+LLD+SM+ 
Sbjct: 1   MSKRVALVDDHALVRAGLRALVEDQPGYEVVAEGGDGQDVEAILRQARPDILLLDLSMKH 60

Query: 61  TSGLDALTQLRASGSTCKVLILSMHTDPDLIMRALESGAHGYLLKDTSATELEQALGAVR 120
             GLDAL Q        +VLILSMH   D ++ AL  GA GYLLKD +A EL+ AL A+ 
Sbjct: 61  MGGLDALRQWHGQYPDVQVLILSMHATADYVLAALRLGARGYLLKDAAAQELDMALQALS 120

Query: 121 HGERYLSPAIAHTVINQALRHTKQGKPSAGERHNLTSRQLEILRLIVRGKSTREIAAGLG 180
             E YLSP IA TVI+ A+   +  + S      LT RQ+EILRLI RG STR+IAAGLG
Sbjct: 121 RNESYLSPGIAQTVISSAIVEGRSRETSLAP--VLTPRQIEILRLIARGVSTRDIAAGLG 178

Query: 181 LSIKTVETHRSQIMKRLQIHDVAGLVLFAVREKIISLDD 219
           LS+KTV+THR+QIM RL +HDV  LVL+AVR+ +IS DD
Sbjct: 179 LSVKTVDTHRAQIMARLNLHDVPSLVLYAVRQGLISPDD 217