Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

Subject, 209 a.a., response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Dechlorosoma suillum PS

 Score =  133 bits (335), Expect = 2e-36
 Identities = 72/209 (34%), Positives = 122/209 (58%), Gaps = 9/209 (4%)

Query: 4   RLLLVDDHSLIRAGVRALVCDIPGYDVVGEADDGNQLLDQVRTLAPDIILLDISMRSTSG 63
           R+LL DDHS++R+G++ L+      +V GEA  G+++L ++R    D++L+D+SM   SG
Sbjct: 3   RILLADDHSIVRSGLKQLLATEADLEVAGEASQGSEVLTRLRQGGIDLLLMDMSMPGISG 62

Query: 64  LDALTQLRASGSTCKVLILSMHTDPDLIMRALESGAHGYLLKDTSATELEQALGAVRHGE 123
           LD + +         V++LSMH +  L+ RAL +GA GY+ KD+    L  A+  V  G 
Sbjct: 63  LDLIRRAHTEAPEVPVVVLSMHNESQLVSRALRAGASGYVTKDSDPAILLAAIRKVARGG 122

Query: 124 RYLSPAIAHTVINQALRHTKQGKPSAGERHN-LTSRQLEILRLIVRGKSTREIAAGLGLS 182
           R++ PA+   ++         G P     H  L+ R+ E+L+L+ +G +   +   L +S
Sbjct: 123 RFIDPALVDAMV--------FGAPEEAPPHEALSDREFEVLQLLSQGLALAAVGERLHVS 174

Query: 183 IKTVETHRSQIMKRLQIHDVAGLVLFAVR 211
            KTV TH++++M++L I + A LV +A+R
Sbjct: 175 AKTVSTHKTRLMQKLGIDNNAELVRYALR 203