Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  260 bits (664), Expect = 1e-73
 Identities = 179/550 (32%), Positives = 298/550 (54%), Gaps = 23/550 (4%)

Query: 18  MLRKSLRVQILSLLGGSVLAMLLIALVCFQFLS-SSVRGYAE-LVDGPLRASQLIDE-AN 74
           M  +++ +   + LG +++  L++ L  F     S +R   E L D  + + + +D  A 
Sbjct: 1   MSLRNMNIAPRAFLGFAMIGTLMLILGVFALSQMSKIRSATEVLADSNVPSIKSLDRFAE 60

Query: 75  LQFKIQVQEWKNVLLRGRQPAEMDKYWQQFQAREQQV---QQLLGQLIDNSDAR-LKASL 130
           +  +++V  ++  LL  R P    K  +    R +Q+   Q +  +LI   D R L +  
Sbjct: 61  VSIRLRVLSYR--LLVNRDPETQQKTIELMAMRNKQITDAQAVYEKLISTPDERNLYSQY 118

Query: 131 QQLRDSHRQLGQAYAQGRQAFLAAGGDPVAGDRAVKGVDRAASEQMSELVEQL------R 184
            QL   +RQL     + R   L    +       +     + S+QM+ ++ +L      +
Sbjct: 119 VQLLGQYRQL-----EDRLKTLTRANNIDELQGLLNNEMVSNSDQMNVVLRKLVDINTAQ 173

Query: 185 ADARQRAASINASAERTVWLGLLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQ 244
            +  +  ASI   +   + +GLL+   +A L+ L+  W++ +S+  PI   +     ++Q
Sbjct: 174 LNEVKEQASIEYDSAFNMVIGLLI---AATLLTLVFAWMLIKSITTPIATALLAAETIAQ 230

Query: 245 GSFAARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARG 304
           G+    +     DE GRL  A  T++D L DT+  +  +A +L  A+ +L ++  + ARG
Sbjct: 231 GNLTRPISIDGTDEAGRLLLAMKTMQDKLRDTLQGISGSATQLASAAEELNAVTDESARG 290

Query: 305 THDQFQRTDQVATAMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLV 364
              Q    +Q ATA+++M++  +EVAR+A   ++A+  A  SA  G  ++Q+T+  I  +
Sbjct: 291 LVQQNDEIEQAATAVNQMTSAVEEVARNATSTSQASRSAATSAGDGRDLVQETVSAIERM 350

Query: 365 NREIAGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVA 424
           + ++ GTA +I  L ++S  IGKVL+VIRG+A+QTNLLALNAAIEAARAGEAGRGFAVVA
Sbjct: 351 SGDVQGTAELIISLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVA 410

Query: 425 DEVRSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRIT 484
           DEVR+LA RT  S +EI ++I ++Q+G  +AV ++ +  +R++      + AGQ L  I 
Sbjct: 411 DEVRALAHRTQQSTSEIERMISSIQTGTEQAVSSMRNSTERAESTLNIAKGAGQALNTIN 470

Query: 485 QAVEAIRDMNRQIATAAEEQTSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSG 544
            AVE I + N  IA+AAEEQ  VA ++ RNL+ I  ++  +      T  A   L  L+ 
Sbjct: 471 SAVEEINERNMVIASAAEEQAQVAREVDRNLVNIRDLSAQSTNGANQTSAASTELSRLAI 530

Query: 545 QLGEVTSRLS 554
            L  + +R +
Sbjct: 531 DLNGMVARFA 540