Pairwise Alignments

Query, 354 a.a., Ribosomal RNA large subunit methyltransferase M from Pseudomonas putida KT2440

Subject, 366 a.a., 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM from Klebsiella michiganensis M5al

 Score =  337 bits (863), Expect = 4e-97
 Identities = 179/355 (50%), Positives = 237/355 (66%), Gaps = 6/355 (1%)

Query: 1   MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELR 60
           MN + ++CRPGFE E  AEI++ A+RL V G+A+ K  S    F C +    E+L+ EL 
Sbjct: 1   MNKVVLYCRPGFEKECAAEITDKASRLEVFGFARVKDDSGYVIFECYQAEDGEKLVRELP 60

Query: 61  FNQLIFPRQWARGGYV--ELPERDRISVLLAQLADF-PVFGSLWLEVLDSNEGKELSTFC 117
           F+ L+F RQ    G +  +LP  DRIS ++  L       G L +EV D+NE KEL  FC
Sbjct: 61  FSSLVFARQMFVVGELLRDLPPEDRISPIVGMLQGVVEKGGELRVEVADTNESKELMKFC 120

Query: 118 RKFEVPLRKALEKAGRLV--DDPGRPRLLLTFISGRRVFVGVASASNSALWPMGIPRLKF 175
           RKF VPLR AL +AG L   + P RP + + FI+    + G + ++N++ + MGIPRLKF
Sbjct: 121 RKFTVPLRAALREAGVLTNYETPKRPVVHVFFIAPGCCYTGYSLSNNNSPFYMGIPRLKF 180

Query: 176 PREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGMLVTAID 235
           P +APSRSTLKLEEA+H FIP ++W++RL + M  VDLGA PGGWTYQLV+R M V+++D
Sbjct: 181 PSDAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVSSVD 240

Query: 236 NGPMAESLMDTGLVQHLMADGFTWQP-KQPVDWMVCDIVEKPARTTSLIETWLGEGLCRE 294
           NGPMA+SLMDTG V  L  DGF ++P +  + WMVCD+VEKPA+  +L+  WL  G CRE
Sbjct: 241 NGPMAQSLMDTGQVTWLREDGFKYRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE 300

Query: 295 AVVNLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLRRL 349
            + NLKLPMK+RY E+ R L  ++       I   I  +QLYHDREEVT H+RRL
Sbjct: 301 TIFNLKLPMKKRYEELSRNLAYIQEQLDEHGINAQIQARQLYHDREEVTVHVRRL 355