Pairwise Alignments

Query, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (648), Expect = 7e-72
 Identities = 160/493 (32%), Positives = 250/493 (50%), Gaps = 14/493 (2%)

Query: 6   PITQRERTFPAQQRLISTTNAKGVITYCNDAFIEISGFTREELTGAPHNLVRHPDVPPAV 65
           P  Q+E       +L+STT+ KGVITYCND F  I+GF  +EL G  HN+VRH  +P A 
Sbjct: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81

Query: 66  FAHMWQTLKQGQPWMGIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTAEQIRR 125
           FA MW  LKQG  W GIVKNR KSG  YWV+AYVTPI+   Q+ G++SVRVK   + +  
Sbjct: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141

Query: 126 AEALYQRINQGKPPVPRRDKWLPVLQDWLPFILISQVGFLIGNWLGH------SWGFALA 179
           A   YQ +   +       K    L   L + L+  +G L+   L H       W +  +
Sbjct: 142 ATKAYQALLAAE---KAGKKIQFKLHTSLRYALL--LGALMSPALAHGFQAPEQWQWLAS 196

Query: 180 AGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMFTDSRGVQARLEMAMLSQDARM 239
               +P G+LGL ++Q  ++   +L +       I+++        +  +  +    AR+
Sbjct: 197 L---LPAGVLGLLFRQELVRTPQQLKQWQNEYDSISRLIYSGADAFSVADYHLKMASARI 253

Query: 240 KTCLTRLQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAATTQEVANHV 299
           +T L R+ DSA  L + A Q      +    L  Q    + V  A + + +  + V++H 
Sbjct: 254 RTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSHT 313

Query: 300 QRTADATQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIK 359
                   +     ++ +     T + ++RL+        T  +L+  + ++G ++  I 
Sbjct: 314 HSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIG 373

Query: 360 GIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQTAS 419
           GIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  +T QI   I  +  T  
Sbjct: 374 GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIE 433

Query: 420 NAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADEISR 479
                +     Q ++         + L  +   ++++  +  ++A+A + Q  +  E+++
Sbjct: 434 AWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQ 493

Query: 480 NISTIAELADQTA 492
           +I +IA +A Q +
Sbjct: 494 HIHSIASVATQNS 506



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 20/154 (12%)

Query: 203 RLAEQTTSDPLIAQMFTDSRGVQARLEMAMLSQDARMKTCLTRLQDSAEHLSDQARQSDA 262
           R  EQ     ++A    + R + AR + A       + T L+ ++     ++    Q++ 
Sbjct: 392 RAGEQGRGFAVVAD---EVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQ 448

Query: 263 LAHKSSTGLER-QRVETE---------QVAAAVNQMAATTQEVANHVQRTADATQEANRL 312
            A  ++T L++ Q VE           +VA+A       T EV  H+   A    + +  
Sbjct: 449 CAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQNSAA 508

Query: 313 TSQGRQIAGETREAIERLSAAVGETGQTVTQLAK 346
           T    Q+A         +S  V E G    Q A+
Sbjct: 509 THTVEQLA-------MAMSGKVAEFGALSKQFAQ 535