Pairwise Alignments

Query, 470 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

Subject, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 75.5 bits (184), Expect = 4e-18
 Identities = 103/448 (22%), Positives = 176/448 (39%), Gaps = 76/448 (16%)

Query: 10  AVNTTLPAKVQQALKANKLQDTALSLVMLPLDGPGTPTVFNADVSVNPASTMKLVTTYAA 69
           A  T LP   + +L    ++D AL    L L         N  +   PAST K++T  AA
Sbjct: 36  AATTKLPQGARYSLL---IEDVALQQNTLEL---------NTHLYYPPASTQKILTALAA 83

Query: 70  LELLGPTFQWKTEFYTDGTLSNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVRTVT 129
              LG  F++ T+    G         +  ++  GDP L    L  L++ ++A     + 
Sbjct: 84  KLELGDKFRFHTDLMRSGQ--------DWIIRFSGDPTLTTADLTTLLKAMKAQSGGRIE 135

Query: 130 GDLVLDRSHFVQPNLPQFNDDGGDENK---PFLVKPDSLLVNLKALRFVARNDGGKVTVA 186
           GDL LD S F            G E     P+    D L V   A       D   +  +
Sbjct: 136 GDLWLDNSVF-----------SGYERAVGWPW----DILGVCYSAPASAINLDANCIQAS 180

Query: 187 VEPPIARIRIDNQVKPVASKKCTGDVRYNPVPQADGISVTVSGQLG-------------- 232
           +             +P    +      Y    Q+  ISVT S Q                
Sbjct: 181 I-----------YTEPQGKTRVYVPEHYPVHVQSQAISVTQSEQESLLCDLELTATPENH 229

Query: 233 ---DGCNS------QTYLSLLDHSTYAAGAVRAIWNELGGNIQGGDRIENV-PKSARLLA 282
              DGC +          ++ D   Y    V  + ++L   ++G  ++     K A+ +A
Sbjct: 230 YTLDGCLALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLNIELKGKIKVGKANTKQAQKIA 289

Query: 283 RAFSPDLVEVIRDINKYSNNTMAQQLFLSLGAQFRTDADGDDARAAQRVVRQWLAKKGIT 342
              S  L  +++ + + S+N +A  L  +LG +F +   G      Q + + + ++ GI+
Sbjct: 290 SHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQP-GSFTNGTQAIKQIFYSRTGIS 348

Query: 343 APHLVMENGSGLSRAERVSTREMAEMLKAAWKSPYAAEFMSSMPLVGMDGTM--RKRLKR 400
                + +GSGLSR  R+  + M E L+  ++       ++ +P  G  GT+  R+ ++ 
Sbjct: 349 LEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGESGTLQYRRSMRA 408

Query: 401 TAMAGEGHIKTGTLNTVRAIAGFSRDSN 428
             ++G+   K+G+L     +AGF  D N
Sbjct: 409 PQISGQIKAKSGSLYGTYNMAGFVMDEN 436