Pairwise Alignments

Query, 800 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 935 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  128 bits (321), Expect = 2e-33
 Identities = 61/144 (42%), Positives = 91/144 (63%)

Query: 495 DVTERRRVHEALAARDRLLEKLSAEVPGGIYQYRLDANGHSCFPYASMGLYDIYEIDLMQ 554
           D+T+ +RV +AL +  R  E+L++ VPG +YQYRL  +G S FPYAS  + +IY +    
Sbjct: 119 DITDLKRVEQALNSMRRQREELASHVPGMLYQYRLRPDGSSHFPYASARIQEIYGVAPED 178

Query: 555 LREDASAVFERIHPDDLERVRRSVRYSAEHLSPWREEYRVCLPRAGLRWVRGEATPEVGE 614
           + EDA+  F  +HP+D +RV  +++ S + L+ W +EYRV  P   + WV GEA+PE   
Sbjct: 179 VVEDATPAFAALHPEDRDRVHETIQASGQSLALWHDEYRVQFPDGRVIWVEGEASPEAMP 238

Query: 615 QGCTLWHGYLTDISDLKGVEEELR 638
            G  LWHGY+ D++  +   EELR
Sbjct: 239 DGSILWHGYIHDVTSRRRSAEELR 262



 Score =  120 bits (301), Expect = 3e-31
 Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 21/324 (6%)

Query: 478 AMLDEQGLWVGYLAICIDVTERRRVHEALAARDRLLEKLSAEVPGGIYQYRLDANGHSCF 537
           AM D   LW GY+    DVT RRR  E L    RL  K+      GI     DA GH   
Sbjct: 236 AMPDGSILWHGYIH---DVTSRRRSAEEL----RLAAKVFEHAGEGILV--TDAQGHIVN 286

Query: 538 PYASMGLYDIYEIDLMQLREDASAVFERIHPDDLERVRRSVRYSAEHLSPWREEYRVCLP 597
              +  +   Y  + +  +       +R   +  +   +++R   EH   W  E   C  
Sbjct: 287 VNRAFSVITGYAREEVMGQTPRLLESDRYDDEFYQTAWQALR---EH-DYWHGELW-CRR 341

Query: 598 RAGLRWVRGEATPEVGEQGCTLWH--GYLTDISDLKGVEEELRALSVTDSLTGIHNRRYF 655
           + G ++        V +    + H     +DI+ LK  +++L  ++  D LTG+ NR   
Sbjct: 342 KNGSQFAALLTISAVPDMRGNIEHYAAMFSDITALKENQQQLERVAHYDLLTGLPNRLLL 401

Query: 656 QERLKIELERAQRDGLPLAVIMLDIDHFKRINDRFGHAVGDRVLRSLCQRIAQRLRRTDV 715
            +RLK  + + +R G+ LAV+ +D+D FK++ND+ GHAVGD++L  L +R+ Q LR  D 
Sbjct: 402 GDRLKQAIAQTRRRGMHLAVVFIDLDGFKKVNDQHGHAVGDKLLSVLSRRMTQVLREGDT 461

Query: 716 FCRLGGEEFM-VLCPGSDAN-QARLLALELWQGVRNVPV-EGVGQVTASFGVAGWRSGE- 771
             RLGG+EF+ VL    D +    +L   +    + VP+ + + +V+AS GV+ +  GE 
Sbjct: 462 LARLGGDEFVAVLVDLPDISLSVPILDRLIEVAAQPVPIGDALCEVSASIGVSYYPQGED 521

Query: 772 -GADALLLRADAGVYAAKQAGRDR 794
             AD LL +AD  +Y AKQAG++R
Sbjct: 522 IDADQLLRQADQAMYFAKQAGKNR 545



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 22/128 (17%)

Query: 382 IIATNLKGVVSTFNAGAERMLGYAASEAIG---RLRLEDLVLPEELNLRAQALSLRFGRA 438
           I+ T+ +G +   N     + GYA  E +G   RL   D    E      QAL       
Sbjct: 275 ILVTDAQGHIVNVNRAFSVITGYAREEVMGQTPRLLESDRYDDEFYQTAWQAL------- 327

Query: 439 IAGGQAMFAETVQEHGAEPGEWTLLRADGSQLVANMLVTAMLDEQGLWVGYLAICIDVTE 498
                       +EH    GE    R +GSQ  A + ++A+ D +G    Y A+  D+T 
Sbjct: 328 ------------REHDYWHGELWCRRKNGSQFAALLTISAVPDMRGNIEHYAAMFSDITA 375

Query: 499 RRRVHEAL 506
            +   + L
Sbjct: 376 LKENQQQL 383