Pairwise Alignments

Query, 745 a.a., fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase from Pseudomonas putida KT2440

Subject, 380 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 74/279 (26%), Positives = 112/279 (40%), Gaps = 43/279 (15%)

Query: 456 ARREQIDCYRLYDADMPEYA-LAVDLYQDWVHVQEYAAPRSVDPDKAQARLLDALAAIPQ 514
           A ++  DC+R++   +   + L VD Y D   VQ +    +V+       L + +A + Q
Sbjct: 66  AEQDHTDCFRVFHGTVEGISGLNVDRYGDTWLVQSFHQTLTVE------ELAEIVAVLTQ 119

Query: 515 ALGISPQRVVLKRRERQSGTRQYERQATEGRFQEV-------NEGGVKLLVNLT-DYLDT 566
            + +      +   +R +G  +    A      ++        E G+K    L  +  D 
Sbjct: 120 EMDLP-----VVYNDRSAGHSRV-LNALSPELDDIACAELVMQENGIKFTTKLRHEGQDP 173

Query: 567 GLFLDHRPMRMRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWARRN 626
            LFLD R  R  ++  +  K  LNLF YT      AA GGA    +VD S   L   R N
Sbjct: 174 LLFLDMRIGREYVRAHSQDKTVLNLFSYTCGIGTAAAMGGAERVVNVDFSSFALAAGRTN 233

Query: 627 LALNGYSERNRLEQSDVMTWLE--------GNRD------------SYDLIFIDPPTFSN 666
             LN  SE     QSD    L         G R+             +DL+F+DPP +  
Sbjct: 234 AELNQVSEVCEFVQSDAFPALRQLAGLSVGGRRNHKLPSYPKLAQTQFDLVFLDPPRY-- 291

Query: 667 SKRMEGVFDVQRDHVQLLDLAMARLAPGGVLYFSNNFRK 705
           +K   G+ D+  D+  L   A+     GG +   NN  K
Sbjct: 292 AKSAFGIVDLVNDYQGLFKPALLSTKTGGTIVCCNNVAK 330