Pairwise Alignments

Query, 340 a.a., Dihydroorotate dehydrogenase (quinone) from Pseudomonas putida KT2440

Subject, 339 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  363 bits (933), Expect = e-105
 Identities = 184/333 (55%), Positives = 239/333 (71%)

Query: 2   YTLARQLLFKLSPETSHDLSLDLIGAGGRLGLNGMLCKQPASLPVSVMGLNFANPVGLAA 61
           Y +A++++F++ PE +H+L++  +   G   LN    +     PVS MGL F NPVGLAA
Sbjct: 3   YKIAQKVMFQMDPERAHNLAIGSLRMTGNGPLNAFYAQNITPAPVSFMGLTFPNPVGLAA 62

Query: 62  GLDKNGAAIDGFAQLGFGFVEIGTVTPRPQPGNPKPRLFRLPEATAIINRMGFNNLGVDH 121
           G+DK+G +ID F  +GFG VE+GTVTPRPQPGN  PRLFRL  A AIINRMGFNN GVD+
Sbjct: 63  GMDKDGESIDAFHAMGFGHVEVGTVTPRPQPGNDLPRLFRLKPAKAIINRMGFNNKGVDN 122

Query: 122 LLGRVRASRYKGVLGINIGKNFDTPVERAVDDYLICLDKVYTAASYITVNVSSPNTPGLR 181
           L+  + A +   ++G+NIGKN DTPVE+  DDYLIC+DKVY  A+YI VN+SSPNTPGLR
Sbjct: 123 LVKNLIAKKTDIMVGVNIGKNKDTPVEQGKDDYLICMDKVYLHAAYIAVNISSPNTPGLR 182

Query: 182 SLQFGDSLKQLLDALAERREQLAGAHGKRVPLAIKIAPDMSDEETALVAAALMESGMDAV 241
           SLQ+GD L +LL A+  ++ +LA  H K VP+A+KIAPD++ EE   +A AL+++  D  
Sbjct: 183 SLQYGDLLDELLSAIKAKQLELADKHKKYVPIALKIAPDLTIEEIENIAQALIKNQFDGA 242

Query: 242 IATNTTLGREGVEALPYGGEAGGLSGAPVLEKSTHIVKVLAGELGGKLPIIAAGGITEGR 301
           IATNTTL R+GV  L    E+GGLSG P+ E ST ++K LA  L G++PII  GGI    
Sbjct: 243 IATNTTLTRDGVSGLANANESGGLSGKPLTELSTKVIKQLATCLQGQIPIIGVGGINSAE 302

Query: 302 HAAEKIAAGASLVQIYSGFIYKGPALIREAVDA 334
            A  K  AGA++VQIYSGFIY+GP LI+E V+A
Sbjct: 303 DALAKFDAGATMVQIYSGFIYQGPKLIKEIVEA 335