Pairwise Alignments

Query, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

Subject, 443 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

 Score =  217 bits (552), Expect = 6e-61
 Identities = 132/401 (32%), Positives = 212/401 (52%), Gaps = 21/401 (5%)

Query: 11  AWVNGSDAPEKTSLNIGYMALTDCASVVVAATQGFAQQHGLT-LNLQRQGSWAGLRDKLV 69
           AW  G D  E +   +G++ALTD A + VAA +G   ++G+T + + +Q SW   RD LV
Sbjct: 46  AWAAGGDV-ETSKAKLGFIALTDAAPLFVAAEKGLFAKYGMTEVEVLKQSSWGTTRDNLV 104

Query: 70  SGE----LDAAHCLYGLVYAVHLGI---GGVPASDMAVLMGLNQNAQAINLSPALQRKGV 122
            G     +D AH L  + Y +  GI      P + M++L  LN   Q I++    +   +
Sbjct: 105 LGSAKNGIDGAHILTPMPYLISAGIVTPNNQPVA-MSILARLNLAGQCISVGEEYRDLKI 163

Query: 123 ----TNPEALARLVHQHGARLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQ 178
               T  +A        G +++ A TFP GTH +W+ YWLA+ GI P  D++++VVPPAQ
Sbjct: 164 GLDSTPFKAALEAKKASGKKVSAAMTFPGGTHDLWMRYWLAAGGIDPNADINTIVVPPAQ 223

Query: 179 MAAHLQAGRIDGFCVGEPWAADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQYPNS 238
           M A+++ G +D FCV EPW A  + +  G+T  T+  +W +HPEK  A    +    PN+
Sbjct: 224 MVANMKVGSMDTFCVCEPWNAQLINQKIGYTANTTGELWHNHPEKAFALRSDYVATNPNA 283

Query: 239 ARALIKAILTASRFIEQSPENRRSTAQLLSASAYLDTPLDSIAPRLLGHYEDGLGNQWQD 298
           A+AL  AI+ A +F E++ EN+   A++ S   ++  P   I  R+ G++  G G   ++
Sbjct: 284 AKALTMAIMEAQQFCEKA-ENKEEVAKICSQRKWIGAPYKDIVDRMKGNFAYGTGKVIEN 342

Query: 299 -PHALRLFDQGRANLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLQLYSEAAQSL 357
            P  +R +D   A+ P+ S  +WF+T+ +RWG L  D D   +  +V +  ++  AA  L
Sbjct: 343 HPEQMRYWDD-HASYPFQSHDLWFLTENKRWGYLPTDFDSQALIAKVNREDIWRAAAGEL 401

Query: 358 GIACPGQPMRSS----LLIDGSRWDGSDPFGYARSFSLHAL 394
            +     P  +S       DG  +D  +P  Y  S ++ A+
Sbjct: 402 NLPAELIPTSTSRGVEKFFDGKVFDPENPQAYLDSLTIKAM 442