Pairwise Alignments

Query, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

Subject, 529 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like from Synechococcus elongatus PCC 7942

 Score =  145 bits (365), Expect = 4e-39
 Identities = 104/356 (29%), Positives = 165/356 (46%), Gaps = 24/356 (6%)

Query: 15  GSDAPEKTSLNIGYMALTDCASVVVAATQGFAQQHGLTLNLQRQGSWAGLRDKLVSGELD 74
           GS   EKT L +G++ +T    ++++   GF Q++GL + + +  SW  +RD  ++GELD
Sbjct: 161 GSGNLEKTDLKVGFIPITCATPIIMSDPLGFYQKYGLKVQVVKMPSWGAVRDSAIAGELD 220

Query: 75  AAHCLYGLVYAVHLGIGGVPASDMAVLMGLNQNAQAINLSPALQRKGVTNPEALARLVHQ 134
           A H L  +  A+ LG+G  P S     +  N N QAI ++     K V   +     V  
Sbjct: 221 AYHMLAPMPIAMTLGLGSAPFSVKLASIE-NINGQAITVAKRHLGK-VKEAKDFKGFV-- 276

Query: 135 HGARLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAHLQAGRIDGFCVG 194
                     FP   H + L Y+LA+ G++P  DV    VPP    A L AG ID   + 
Sbjct: 277 ------IGVPFPFSMHNLLLRYYLAAGGLNPDTDVQIRPVPPPDSIAQLVAGDIDAMLMP 330

Query: 195 EPWAADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQYPNSARALIKAILTASRFIE 254
           +P+   AV +  GF    ++ IW  HP    A    + ++ PN+ RAL KAI+ A+ +  
Sbjct: 331 DPFNQRAVYEDAGFIHLLTKEIWNGHPCCAFAAGEPWIQENPNTFRALNKAIIEATGYAS 390

Query: 255 QSPENRRSTAQLLSASAYLDTPLDSIAPRLLGHYEDGLGNQWQDPHALRLFDQGRANLPY 314
           ++ ENR   A+ +S+  YL+ P + +   L G + +G G +   P  +          P+
Sbjct: 391 KA-ENRAEIAKAISSRQYLNQPPEVVEAVLTGKFPNGQGQELDVPDRIDF-----NPYPW 444

Query: 315 LSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLQLYSEAAQSLGIACPGQPMRSSL 370
            S   W  +Q  RW         LG A  V Q   Y +  Q++ +    Q +   +
Sbjct: 445 QSFANWIQSQLVRWD--------LGKAAGVIQPDQYDKNGQAIYLTTEAQTLEKEV 492