Pairwise Alignments

Query, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  174 bits (441), Expect = 7e-48
 Identities = 114/376 (30%), Positives = 177/376 (47%), Gaps = 4/376 (1%)

Query: 18  APEKTSLNIGYMALTDCASVVVAATQGFAQQHGLTLNLQRQGSWAGLRDKLVSGELDAAH 77
           A ++ ++ +G++   DCA + +A   G  Q  GL++ LQ   +W  L D +  G+L+ A 
Sbjct: 275 ASQQKTVRLGFLPGNDCAPLAIAQELGLFQDLGLSVELQSFLTWEALEDSIRLGQLEGAL 334

Query: 78  CLYGLVYAVHLGIGGVPASDMAVLMGLNQNAQAINLSPALQRKGVTNPEALARLVHQHGA 137
            +     A+ +G+GG     +A  + +++N  AI LS      GV + E L + +     
Sbjct: 335 MMAAQPLAMTMGLGGHRPFAIATPLTVSRNGGAIALSRRYLNAGVRSLEDLCQFLAATPQ 394

Query: 138 RLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAHLQAGRIDGFCVGEPW 197
           RL  A   P    A+ L YWLAS G++P +DV+ V + P +M   L+AG IDGF  GE  
Sbjct: 395 RLRLAIPDPIAMPALLLRYWLASAGLNPEQDVELVGMSPYEMVEALKAGDIDGFAAGEMR 454

Query: 198 AADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQYPNSARALIKAILTASRFIEQSP 257
            A AV  G  + LAT   IW  HPEKVL     + +  P +A AL  A+L A    +  P
Sbjct: 455 IALAVQAGAAYVLATDLDIWAGHPEKVLGLPEAWLQVNPETAIALCSALLKAGELCD-DP 513

Query: 258 ENRRSTAQLLSASAYLDTPLDSIAPRLLGHYEDGLGNQWQDPHALRLFDQGRANLPYLSD 317
             R    ++L    YL +   ++  R   +++ GLG++         F   +AN P   +
Sbjct: 514 RQRDRIVEVLQQPQYLGSAAGTVLQR---YFDFGLGDEPTQILRFNQFHVDQANYPNPLE 570

Query: 318 GMWFMTQFRRWGLLREDPDYLGVARQVQQLQLYSEAAQSLGIACPGQPMRSSLLIDGSRW 377
           G W +TQ  RWGL     +   +  +V +  +Y  A  ++G        R   L D   +
Sbjct: 571 GTWLLTQLCRWGLTPLPKNRQELLDRVYRRDIYEAAIAAVGFPLITPSQRGFELFDAVPF 630

Query: 378 DGSDPFGYARSFSLHA 393
           D   P  Y   F + A
Sbjct: 631 DPDSPLRYLEQFEIKA 646