Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 499 a.a., RND efflux system, outer membrane lipoprotein, NodT (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (377), Expect = 2e-40
 Identities = 121/465 (26%), Positives = 209/465 (44%), Gaps = 10/465 (2%)

Query: 14  LATALGMLAALAACGHQPT---PAEPAVALQADPLANMPAGVSKQPLPERWWA-LYQDPQ 69
           L + + +LA L  C   P    PA P      D  A   A    + +    W   ++DP 
Sbjct: 17  LMSCVAVLALLGGCSFIPDYQRPAAPVPTAWPDGPAYDQAQAGGETIATLGWREFFRDPA 76

Query: 70  LNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQTLAEA 129
           L R + QAL HN+ L  A   V++  A      A   P+ + G   T+ R+   +T  + 
Sbjct: 77  LQRLIAQALEHNRDLRSAALTVESARATYRIERADLLPTVNGGTDLTHQRTP--RTATQT 134

Query: 130 TDSNAPSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQTTRAY 189
             +   + +  N G   +Y++D +G++R+  + A  Q  A+  A   V++ ++A+   AY
Sbjct: 135 GKAQTTTNYSANIGTT-SYEIDFFGRIRSLEEEALEQYFATEEARRSVQIALIAEVANAY 193

Query: 190 IDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPMLSA 249
           I        L+  ++ L T  +S  L+Q+    GV T LD  +     E  RA   + + 
Sbjct: 194 ITLLADRTLLQLTEETLNTRIESFNLTQQSFDRGVGTRLDVTQAQTTVETARANRAIYTR 253

Query: 250 RRQMALYELSMLSGQ---ASVAEATTCVAIPTLSVPLPAGDGWHLLERRPDVRQAERELQ 306
                +  L +L G    A++   T  + +      +PAG    LL RRPD+ +AE +L 
Sbjct: 254 YVAQDINALRLLVGDQLDANLLAGTPPLDLGRFFPNVPAGLPSDLLLRRPDILEAEHKLV 313

Query: 307 AATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKANRAR 366
           AA       RA  +PK+S   +L ++   L +L  S ++ + +GP +     +   N A 
Sbjct: 314 AANANIGAARAAFWPKISLTGNLGTASASLGDLFSSGSLAWSVGPSLSVPLFDFWRNEAT 373

Query: 367 VSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFALAQGN 426
           +  A+  +   VA Y     +A ++V  ALA       +L+A    +A +Q S+AL++  
Sbjct: 374 LESAKVQREIAVAAYEKSIQTAFREVADALAAKGTLGDQLRAQQDLVAATQESYALSRNR 433

Query: 427 YRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGG 471
           Y  G  + L+ LDS+R + + + +    R       + L++ LGG
Sbjct: 434 YDQGIDNYLSTLDSQRSLYAAQQDLISVRANQLTNYITLYKVLGG 478