Pairwise Alignments

Query, 504 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

Subject, 509 a.a., Inner membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

 Score =  255 bits (651), Expect = 3e-72
 Identities = 139/488 (28%), Positives = 262/488 (53%), Gaps = 7/488 (1%)

Query: 13  VAVLGGLFGCFMAGMNVHVTSAALPEIRGSLGASFEEGSWISTAYLVAEIVMIPLTAWLV 72
           ++ +G     FM  ++  + + ALP I G+LG S E+G+W+ T++ V+  + +PLT WL 
Sbjct: 14  LSTIGLSLATFMQVLDTTIANVALPTISGNLGVSSEQGTWVITSFAVSNAIALPLTGWLS 73

Query: 73  DVFSLRRVMWTGSLIFLIASVACSWAPNLEAMIVIRVIQGAAGAVLIPLSFQLIITELPA 132
             F   ++    +++F++AS  C  + ++  +I  RV+QG     L P++  L+I   P 
Sbjct: 74  RRFGEVKLFLWATMLFVLASFLCGISTSMPELIGFRVLQGLVAGPLYPMTQTLLIAVYPP 133

Query: 133 SKMAMGMALFSLANSVAQAAGPSIGGWLTDAYSWRWIFYLQLFPGIALLLAIAWSIEAKP 192
           ++  M +AL ++   VA  AGP +GGW+TD+YSW WIF++ +  G+  ++ +   ++A+P
Sbjct: 134 ARRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGVFAVMVVRSQLKARP 193

Query: 193 MKLELLRKGDWLGIAAMVIGLGGLQIVLEEGGRLDWFGSPLIVGMSVVAAIALVVFVVTQ 252
           + +   +  D++G+  ++IG+G LQ++L++G  LDWF S  I+  + ++ IAL VFV+ +
Sbjct: 194 V-VTSYQPMDYVGLITLIIGVGALQVILDKGNDLDWFESNFIIVGAAISVIALAVFVIWE 252

Query: 253 LFGQRAFINLRLLGHYNFGVASVAMFIFGAATFGLVFLVPNYLSQLQGFSAHDVGVALIA 312
           +  +   +NLRL  + NF + ++ +    A  FG+  ++P +L    G++A   G+A+  
Sbjct: 253 MTDKHPVVNLRLFAYRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAP 312

Query: 313 YGVVQLLLAPLMPRLMGWTSAKFMVASGFLIMALGCWLGAGLSADSADNVIIPSTVVRGI 372
            G++ +LL+P + +       + +    FL + L C++ AG + +     I    +  GI
Sbjct: 313 IGILPVLLSPFVGKYAHKFDLRLLAGGAFLCIGLSCFMRAGFTNEVDFQHIALVQLFMGI 372

Query: 373 GQP-FIMVALSVLAVAGLDKREAGSASAVFSMLRNLGGAIGTAGLTQLVATRERFHSERI 431
           G   F M  LS+L ++ L   +    + + + LR LGG+   +  T +   R   H   +
Sbjct: 373 GVALFFMPTLSIL-MSDLPPSQIADGAGLATFLRTLGGSFAASLTTWIWIRRADQHHAYL 431

Query: 432 HEQVTLFEPSVQARINQTVQSWLPPQQQMLEALEATIRREAYLMAYSDAFYLACLALVGC 491
            E +T +EP+ +  +N    +  P   Q    L+  +  +AY+++  D F L   A +G 
Sbjct: 432 SESITTYEPATREALNTLGGAGNPAYAQ----LDHVLTSQAYMLSTVDYFTLLGWAFMGL 487

Query: 492 ALAALLLR 499
            L   L +
Sbjct: 488 ILLVWLAK 495