Pairwise Alignments

Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  603 bits (1554), Expect = e-176
 Identities = 368/1029 (35%), Positives = 592/1029 (57%), Gaps = 14/1029 (1%)

Query: 1    MRFTDVFVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQ 60
            M  + +F+RRPV A V+S L+++MG+ AM +L +R+ P ++S+ ++++T Y GA+ E++ 
Sbjct: 1    MDVSSLFIRRPVFATVLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVD 60

Query: 61   GFVTQPITQAVSSVEGIDYLSSSSQQGRSLITLRMVLNRDSTQALAETMAKVNQVRYRLP 120
              +T+ I  AV+ V GI  ++S S++G+    +         +A+ +    V +VR  LP
Sbjct: 61   TDITEVIENAVAGVSGIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLP 120

Query: 121  EKAYDPVVELSAGDSTAVAYVGFASDSLSIPELSDYLSRVVEPQFSGIDGVAKVQSFGGQ 180
            +   +P +  S  DS  V  +   S  ++  EL+D+  R +  + + IDGVA+V  +G +
Sbjct: 121  DDIEEPRIAKSDTDSDPVMRLSLTSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGER 180

Query: 181  RLAMRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQVRGQYVLADIQVDTDLTRVEDF 240
            R A+RLWLD   MA R VT  DV  A+R  N +   G++     L  ++  T LT  E F
Sbjct: 181  RQAIRLWLDRRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEAF 240

Query: 241  RELIIRNDGTDLVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTPSGNPLVIVEGIR 300
               +I+      +R+RD+  VEL      T+  ++G+ A+ +G+      N + I   IR
Sbjct: 241  GSTVIKVVDGYPLRVRDVARVELGVENDDTTVRVEGRDALTMGVLRQSQANTVAISNRIR 300

Query: 301  QLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVIWLCLGSLRSVLI 360
              + +++ +LP G+ + ++ + A FI+ SIHEV+ TL  + LIV++V +  LGS+R+ L+
Sbjct: 301  AEIDRLRPSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATLV 360

Query: 361  AVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSPI 420
              V IP++++G    +L+ GFS+NLLTLLA++L+IGLVVDDAIVV+EN+ R IE G+  +
Sbjct: 361  PTVTIPVAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPKL 420

Query: 421  AAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAGAVIVSGIVALTL 480
             AA  G R++   V+A +LTL AV+ PI  M G  G LF EF   LA AV +S +VALTL
Sbjct: 421  VAAARGTRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALTL 480

Query: 481  SPVMSSLLLQPGQQHGAMAAIADRLFGTLSGVYGRVLAYTLAHRWISGGVALLVCLSLPW 540
             P +++ +L  G+  G +A   +  FGTLS  Y R L+  L    +   VALL   +  W
Sbjct: 481  CPPLAAGVLAEGKAEGRLAHALNYAFGTLSRGYQRALSAVLGLPMVVLTVALLCGGASFW 540

Query: 541  LYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAERFALKLDQVMKSIAETTDTWIINGTD 600
            LY    +EL P ED+  V+ ++  PQ A+  Y +     ++  ++ + +  +   +    
Sbjct: 541  LYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLDRGEAVGVLAQV 600

Query: 601  G----PAASFGGINLSAWQARERSAAQVQAQLQQAVADIEGSSIFAFQVASLPGSSGGLP 656
            G    P   +  I L  W+ R R+A+ +   L++ +  + G++      A L       P
Sbjct: 601  GQWNRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKLAGATATPVVPAGLGLRGSRTP 660

Query: 657  VQMVLRSAQDYPELFQTMEVLKQRARDSGLFAVVDSDLDYNNPVVKVRVDRAKAASLGIS 716
            +Q+V+    DY E+      L +RA +       + D + N P + V +DR +A  LG+ 
Sbjct: 661  LQVVI-GGPDYAEVEVWANALLKRAEELPGLINPELDFEQNQPQLSVGIDRDRADDLGVG 719

Query: 717  MQAIGESLGVLVGEQYLNRFALFGRSYDVIPQSIQDQRLTPAALSRQYVRAE-DGSLVPL 775
            ++AIG++L  ++  + + RF   GR Y V+ Q+  + R TP+ LS  +VRAE  G+LVPL
Sbjct: 720  VEAIGQTLQTMLASREVTRFVDRGREYQVVVQARPEDRRTPSDLSNTFVRAEKGGALVPL 779

Query: 776  ATLVRLDIEVAPNRLLQFDQQNASTLQAIPAPGVSMGNAVAFLEQLTAE-LPPGFSHDWQ 834
              LV L        L ++ +  + TLQ+  APG  MG A+  +  L ++ +PP       
Sbjct: 780  DALVILKETAGAPDLNRYARLPSITLQSALAPGYDMGQAIDDVMALASQTVPPEARLSLA 839

Query: 835  SESRQYVQEGFALMWAFLAALVVIYLVLAAQYESLVDPLIILVTVPLSICGALLPLALGW 894
             +S+++++    +++ FL ALV++YLVLAAQ+ES + PLII+++VPL++ GALL L   W
Sbjct: 840  GQSKEFLETSGGVLFTFLMALVIVYLVLAAQFESFLHPLIIMLSVPLAVSGALLSL---W 896

Query: 895  AT---LNIYTQIGLVTLIGLISKHGILMVAFANEIQVRDNLDRAAAIVRAAQIRLRPVLM 951
            AT   +N+Y+QIG+V LIGL +K+GIL+V FAN+++      R  AI+ AA +RLRP+LM
Sbjct: 897  ATGNSINVYSQIGIVLLIGLTAKNGILIVEFANQLRDEGRSVR-EAILEAASLRLRPILM 955

Query: 952  TTAAMTFGVLPLLFASGAGANSRFGLGVVIVCGMLVGTLFTLFVLPTIYAWLARDHRVST 1011
            T      G +PL ++SGAGA SR  +G+V++ G+ + +L TLFV P +Y  LA   R + 
Sbjct: 956  TVICTILGAVPLAWSSGAGAESREAIGIVVIGGLGLASLLTLFVTPVLYDLLAPFTRSAG 1015

Query: 1012 ARARQLVEA 1020
            A  + L  A
Sbjct: 1016 AVGQALDRA 1024