Pairwise Alignments
Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440
Subject, 1046 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS
Score = 500 bits (1288), Expect = e-145
Identities = 339/1038 (32%), Positives = 547/1038 (52%), Gaps = 50/1038 (4%)
Query: 1 MRFTDVFVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQ 60
MR FVRRP+ A V++ IIL+GL A+ +LPI +YP + ++I YPGA+ + M
Sbjct: 1 MRLPAFFVRRPIFAWVIALFIILLGLIAIPQLPIARYPTVAPPMVSIYAVYPGATPQTMN 60
Query: 61 GFVTQPITQAVSSVEGIDYLSSSSQ-QGRSLITLRMVLNRDSTQALAETMAKVNQVRYRL 119
V I + +SSV+ + Y SS+ G + IT + A + ++ V RL
Sbjct: 61 DAVVGLIERELSSVKNLLYFESSTDTSGFAQITATFKPGTNPELAQVDVQNRIKTVEPRL 120
Query: 120 PEKAYDPVVELSAGDSTAVAYVGFASDSLSIPE--LSDYLSRVVEPQFSGIDGVAKVQSF 177
P ++ + S+ + ++ SD E L+DY++R + + +DGV +VQ F
Sbjct: 121 PAVVRQNGLKFESAASSFLMFISLKSDDGRHSEVALNDYMARSMVEELRRVDGVGRVQLF 180
Query: 178 GGQRLAMRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQV------RGQYVLADIQVD 231
G + AMR+W+D ++ ++ +D++ AV N Q PG+V GQ V + V
Sbjct: 181 GSEA-AMRIWVDPAKLVAYKLSMSDLSDAVTQQNTQIAPGRVGGAPTVEGQRVTFPVSVQ 239
Query: 232 TDLTRVEDFRELIIRN--DGTDLVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTPS 289
LT E F +++R DG+ +V L D+ V L A + S +GK A LG+ +P
Sbjct: 240 GQLTTPEQFAAIVLRANPDGSKVV-LGDVARVALGAQSYGESNRENGKLAAALGVQMSPG 298
Query: 290 GNPLVIVEGIRQLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVIW 349
N + ++ L ++ +T+PPG+ ++ ++TA F+ SI +V +TL+EAML+V LV++
Sbjct: 299 ANAVRTSAAVKARLAELAKTMPPGMSYSVPFDTAPFVQISIEKVAQTLLEAMLLVFLVMY 358
Query: 350 LCLGSLRSVLIAVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENV 409
L L ++R I + P+++LG +ML GFS+N+LT+ MVLAIG++VDDAIVVVENV
Sbjct: 359 LFLQNVRYTFIPAIVAPIALLGTFTVMLATGFSVNVLTMFGMVLAIGIIVDDAIVVVENV 418
Query: 410 HRHI-EEGKSPIAAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAG 468
R + EG SP A L +EI+G V+ +TL L AV+ P+ L GG G ++R+F L++A
Sbjct: 419 ERLMASEGLSPREATLKAMKEISGAVVGITLVLIAVFIPMALAGGSVGVIYRQFTLSMAV 478
Query: 469 AVIVSGIVALTLSPVMSSLLLQP--GQQH--GAMAAIADRLFGTLSGVY----------- 513
+++ S +ALTL+P + + LL+P G H G +R+F ++G Y
Sbjct: 479 SILFSAFLALTLTPALCATLLKPVDGAHHEKGGFFGWFNRMFERMTGRYETRVVAMVRRS 538
Query: 514 GRVLAYTLAHRWISGGVALLVCLSLPWLYLLPQRELAPPEDQAAVLTAIKSPQHASLEYA 573
GR +A LA GV L LP +L P EDQ +T+I+ P A+ E
Sbjct: 539 GRAMAVFLAIT----GVLALGFWQLPSAFL-------PEEDQGYFITSIQLPSDATTERT 587
Query: 574 ERF--ALKLDQVMKSIAETTDT---WIINGTDGPAASFGGINLSAWQARERSAAQVQAQL 628
A + V + E W +G+ GP A+ L W R+ + A +
Sbjct: 588 LDVVKAFEAHAVGRPGIEAVQAVLGWGFSGS-GPNAAIIFTTLKEWHERQGATAPAEVMA 646
Query: 629 QQAVADI--EGSSIFAFQVASLP-GSSGGLPVQMVLRSAQDYPELFQTMEVLKQRARDSG 685
Q + EG I A G+S G +++ R+ Q Y L + L A +S
Sbjct: 647 AQEAMGVAREGMVINLMPPAIEELGTSSGFSMRLQDRANQGYAALMAAQQQLLAMAAESK 706
Query: 686 LFAVVDSDLDYNNPVVKVRVDRAKAASLGISMQAIGESLGVLVGEQYLNRFALFGRSYDV 745
L V + V++ +DR KA +LG+S I ++L +G Y+N F GR V
Sbjct: 707 LVTGVYPEGLPPGSSVRLDIDRQKAEALGVSFANISDTLSTAMGSLYVNDFPNAGRMQQV 766
Query: 746 IPQSIQDQRLTPAALSRQYVRAEDGSLVPLATLVRLDIEVAPNRLLQFDQQNASTLQAIP 805
I Q+ R+ + R +VR G +V L+ +V AP +L+++ A +
Sbjct: 767 IIQAEARSRMQVEDILRLHVRNNAGGMVALSEVVTPQWSDAPLQLVRYLGYPAVRIAGSA 826
Query: 806 APGVSMGNAVAFLEQLTAELPPGFSHDWQSESRQYVQEGFALMWAFLAALVVIYLVLAAQ 865
APG S G A+A +E+L A+LPPGF+ +W +S Q Q +++V++LVLAA
Sbjct: 827 APGASSGEAMAEMERLAAKLPPGFAVEWTGQSLQERQSAAQAPLLMALSMLVVFLVLAAL 886
Query: 866 YESLVDPLIILVTVPLSICGALLPLALGWATLNIYTQIGLVTLIGLISKHGILMVAFANE 925
YES PL +++ VPL + GA+ + +++ ++G++T+IGL +K+ IL++ FA +
Sbjct: 887 YESWTIPLAVMLVVPLGLIGAVFAVYARGMPNDVFFKVGMITVIGLSAKNAILIIEFAKQ 946
Query: 926 IQVRDNLDRAAAIVRAAQIRLRPVLMTTAAMTFGVLPLLFASGAGANSRFGLGVVIVCGM 985
+ + A AA++RLRP+LMT+ A GV+PL+ ASGA A ++ +G + GM
Sbjct: 947 LH-EQGMGLIEAAAAAARLRLRPILMTSLAFALGVVPLMLASGASAETQHAIGTGVFGGM 1005
Query: 986 LVGTLFTLFVLPTIYAWL 1003
+ T+ +F++P + ++
Sbjct: 1006 ITATVLAVFLVPVYFVFV 1023
Score = 85.1 bits (209), Expect = 2e-20
Identities = 123/521 (23%), Positives = 221/521 (42%), Gaps = 46/521 (8%)
Query: 8 VRRPVLALVVSSLIILMGLFAMG--KLPIRQYPLLESSTITISTEYPGASA-----ELMQ 60
VRR A+ V + + G+ A+G +LP P + S + P + ++++
Sbjct: 535 VRRSGRAMAV--FLAITGVLALGFWQLPSAFLPEEDQGYFITSIQLPSDATTERTLDVVK 592
Query: 61 GF----VTQPITQAVSSVEGIDYLSSSSQQGRSLITLRMVLNRDSTQALAETMAK---VN 113
F V +P +AV +V G + S TL+ R A AE MA +
Sbjct: 593 AFEAHAVGRPGIEAVQAVLGWGFSGSGPNAAIIFTTLKEWHERQGATAPAEVMAAQEAMG 652
Query: 114 QVRYRLPEKAYDPVVE---LSAGDSTAV---AYVGFASDSLSIPELSDYLSRVVEPQFSG 167
R + P +E S+G S + A G+A+ + +L L+ E +
Sbjct: 653 VAREGMVINLMPPAIEELGTSSGFSMRLQDRANQGYAALMAAQQQL---LAMAAESKL-- 707
Query: 168 IDGVAKVQSFGGQRLAMRLWLDSEQMAGRGVTAADVAQ----AVRANNYQATPGQVRGQY 223
+ GV G ++RL +D ++ GV+ A+++ A+ + P R Q
Sbjct: 708 VTGVYPEGLPPGS--SVRLDIDRQKAEALGVSFANISDTLSTAMGSLYVNDFPNAGRMQQ 765
Query: 224 VLADIQVDTDLTRVEDFRELIIRNDGTDLVRLRDIGTVELSAAATQTSATMDGKPAVHLG 283
V+ + + + +VED L +RN+ +V L ++ T + S A Q + G PAV +
Sbjct: 766 VIIQAEARSRM-QVEDILRLHVRNNAGGMVALSEVVTPQWSDAPLQLVRYL-GYPAVRIA 823
Query: 284 LFPTP---SGNPLVIVEGIRQLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEA 340
P SG + +E ++ LPPG V ++ + ++ L + +
Sbjct: 824 GSAAPGASSGEAMAEME-------RLAAKLPPGFAVEWTGQSLQERQSAAQAPL-LMALS 875
Query: 341 MLIVVLVIWLCLGSLRSVLIAVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVD 400
ML+V LV+ S L ++ +PL ++GA + G ++ + M+ IGL
Sbjct: 876 MLVVFLVLAALYESWTIPLAVMLVVPLGLIGAVFAVYARGMPNDVFFKVGMITVIGLSAK 935
Query: 401 DAIVVVENVHRHIEEGKSPIAAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFR 460
+AI+++E + E+G I AA A AR P++ +L A P+ L G +
Sbjct: 936 NAILIIEFAKQLHEQGMGLIEAAAAAARLRLRPILMTSLAFALGVVPLMLASGASAETQH 995
Query: 461 EFALTLAGAVIVSGIVALTLSPVMSSLLLQPGQQHGAMAAI 501
+ G +I + ++A+ L PV +L ++ A A +
Sbjct: 996 AIGTGVFGGMITATVLAVFLVPVYFVFVLSLSERLAASATL 1036