Pairwise Alignments

Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1044 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS

 Score =  530 bits (1364), Expect = e-154
 Identities = 344/1023 (33%), Positives = 550/1023 (53%), Gaps = 31/1023 (3%)

Query: 7    FVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQGFVTQP 66
            F+ RP+ A V+S +I++ G+ A   LPI QYP +   T+ IS  YPGASAE +   V  P
Sbjct: 5    FINRPIFASVISIVIVIAGIMASRVLPISQYPEIAPPTVIISASYPGASAETLAKTVAAP 64

Query: 67   ITQAVSSVEGIDYLSSSSQQGRSL-ITLRMVLNRDSTQALAETMAKVNQVRYRLPE--KA 123
            I + +S VE + Y +S++    SL IT    +  D   A      +V     RLP+  + 
Sbjct: 65   IEEQLSGVENLMYFNSTASANGSLSITATFEVGTDVDMATVNVNNRVKIAEPRLPDVVRQ 124

Query: 124  YDPVVELSAGDSTAVAYVGFASDSLSIPELSDYLSRVVEPQFSGIDGVAKVQSFGGQRLA 183
            Y   V+  + D   VA +     + +   LS+Y    +      I GV   Q FG    +
Sbjct: 125  YGVTVQKRSNDILMVAAITSPEGTRTPLYLSNYALVNILDDLKRIPGVGDAQIFGALDYS 184

Query: 184  MRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQV------RGQYVLADIQVDTDLTRV 237
            MRLWL  ++MA  GVT  +++ A+ A N Q   G++       GQ ++  +     LT  
Sbjct: 185  MRLWLRPDRMAQLGVTTTEISNAIAAQNKQNAAGKIGQEPAPNGQQLVYTVTAKGRLTTP 244

Query: 238  EDFRELIIRNDGTD-LVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTPSGNPLVIV 296
            E F  ++IR DG    + L+D+  VEL A     S  + GKP V +G+F     N L + 
Sbjct: 245  EQFGNIVIRADGPKGALYLKDVARVELGAQNYDASTALMGKPVVGVGIFLQSGANALDVA 304

Query: 297  EGIRQLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVIWLCLGSLR 356
            + ++  + +++Q  P  V   + ++T +F+ ASI EV+ TLVEA+++V +V+++ L + R
Sbjct: 305  KKVKLRMDELKQKFPSDVDYVVPFDTTKFVQASITEVVHTLVEALVLVAIVVFVFLQNWR 364

Query: 357  SVLIAVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENVHRHI-EE 415
            + +I +VA+P+S++G    + +FGFS+N LTL AMVLAIG+VVDDAIVV+ENV R + EE
Sbjct: 365  ATVIPLVAVPVSLIGTFAGLWLFGFSINTLTLFAMVLAIGIVVDDAIVVLENVERLMWEE 424

Query: 416  GKSPIAAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAGAVIVSGI 475
              +P  AA+   RE++  V+A+ L L AV+ P+  +GG+ G L+++FA+T+A +V +SGI
Sbjct: 425  KMAPKEAAIEAMREVSSAVVAIVLVLCAVFIPVAFLGGIAGMLYKQFAVTVAISVTLSGI 484

Query: 476  VALTLSPVMSSLLLQPGQQHGAMAAIADRLFGTLSGVYGRVLAYTLAHRWISGGVALLVC 535
            VALTL+P + +LLLQP  +  A+    +RLF   +  Y   +  TL HR I G VA +V 
Sbjct: 485  VALTLTPALCALLLQPKHEEPAIFRPFNRLFERFTKSYTDTVNKTLHHR-IIGTVACVVI 543

Query: 536  LSLP-WLYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAE------RFALKLDQVMKSIA 588
            L    +++        P EDQ  +++A+  P  ASL+         +  +K D+ +  + 
Sbjct: 544  LGGSFFMFRAVPGGFVPAEDQGYLISALMLPDGASLQRTRATGDQFQSMIKQDEAVDRVF 603

Query: 589  ETTDTWIINGTDGPAASFGGINLSAWQARERSAAQVQAQLQQAVADIEGSSIFAFQVASL 648
                  II G   P A    I L  W  R+  A  +  +       +       F   ++
Sbjct: 604  VIAGNDIIGGGMKPNAGTVFIPLKDWDERKAGADDLAKKFMGMGMMLPDGLGLVFNPPAI 663

Query: 649  P--GSSGGLPVQMVLRSAQDYPELF----QTMEVLKQRARDSGLFAVVDSDLDYNNPVVK 702
               G++GG    +  R   D  +L     Q ME LK+R    G    +++     +P + 
Sbjct: 664  RGLGNAGGFEAYIQARGDADPQKLSGVVQQFMEGLKKRQELVG----INTFFRPTSPQLS 719

Query: 703  VRVDRAKAASLGISMQAIGESLGVLVGEQYLNRFALFGRSYDVIPQSIQDQRLTPAALSR 762
            V V+ AKA S+GI++  + ++L   +G  Y+N F L GR+Y V  Q+    R  P  L R
Sbjct: 720  VEVNEAKAISMGIAVSDVYQTLQATMGTLYVNDFNLNGRTYRVQLQADGQFRSKPEDLGR 779

Query: 763  QYVRAEDGSLVPLATLVRLDIEVAPNRLLQFDQQNASTLQAIPAPGVSMGNAVAFLEQLT 822
             YV++  GS+VP++ L+++   V P +L +F+   ++ +     P VS G+A+  +E++ 
Sbjct: 780  VYVKSSSGSMVPVSALIKVKSVVGPEQLERFNGFLSAKVMGSSVPKVSTGDAIKIVEEVA 839

Query: 823  AE-LPPGFSHDWQSESRQYVQEGFALMWAFLAALVVIYLVLAAQYESLVDPLIILVTVPL 881
             E LP G+  +W  ++ Q  + G     AF   +++++L+LAAQYE    PL +++ VP 
Sbjct: 840  KETLPAGYELEWTGQAFQEKRTGTTSAVAFGFGIIMVFLILAAQYEKWSLPLAVILAVPF 899

Query: 882  SICGALLPLALGWATLNIYTQIGLVTLIGLISKHGILMVAFANEIQVRDNLDRAAAIVRA 941
            ++ GAL  + +     +IY QIGLV LIGL +K+ IL+V FA + +  + L    A +  
Sbjct: 900  ALFGALAAVMIRGMPNDIYFQIGLVVLIGLAAKNAILIVEFAAQKRA-EGLGVLEAALEG 958

Query: 942  AQIRLRPVLMTTAAMTFGVLPLLFASGAGANSRFGLGVVIVCGMLVGTLFTLFVLPTIYA 1001
            A++R RP++MT+ A   GV PL+ A+GAGA +R  +G  +  GML  T      +P  + 
Sbjct: 959  ARLRFRPIVMTSLAFILGVFPLVKATGAGAAARKSMGTGVFGGMLAATFIATIFIPMFFT 1018

Query: 1002 WLA 1004
            WL+
Sbjct: 1019 WLS 1021