Pairwise Alignments

Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1048 a.a., multidrug efflux RND transporter permease subunit from Klebsiella michiganensis M5al

 Score =  506 bits (1304), Expect = e-147
 Identities = 322/1027 (31%), Positives = 539/1027 (52%), Gaps = 29/1027 (2%)

Query: 7    FVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQGFVTQP 66
            F+ RP+ A V++ +I+L G  ++ KLPI QYP +    I+I+  YPGA AE +Q  VTQ 
Sbjct: 5    FIDRPIFAWVIAIIIMLAGGLSILKLPIAQYPTIAPPAISITAMYPGADAETVQNTVTQV 64

Query: 67   ITQAVSSVEGIDYLSSSSQQ-GRSLITLRMVLNRDSTQALAETMAKVNQVRYRLPEKAYD 125
            I Q ++ ++ + Y+SS+    G + ITL      D   A  +   K+      LP++   
Sbjct: 65   IEQNMNGIDHLMYMSSNGDSTGTATITLTFESGTDPDIAQVQVQNKLALATPLLPQEVQQ 124

Query: 126  PVVELSAGDSTAVAYVGF--ASDSLSIPELSDYLSRVVEPQFSGIDGVAKVQSFGGQRLA 183
              + +    S+ +  VG    + +++  ++SDY++  ++   S   GV  VQ FG Q  A
Sbjct: 125  QGISVEKASSSFLMVVGVINTNGTMNQDDISDYVAANMKDAISRTSGVGDVQLFGSQ-YA 183

Query: 184  MRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQ------VRGQYVLADIQVDTDLTRV 237
            MR+W+D  ++    +T  DV  A++A N Q   GQ      V+GQ + A I   T LT  
Sbjct: 184  MRIWMDPNKLNNFQLTPVDVISALKAQNAQVAAGQLGGTPPVKGQQLNASIVAQTRLTNT 243

Query: 238  EDFRELIIR-NDGTDLVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTPSGNPLVIV 296
            E+F  ++++ N     VRLRD+  +EL        A  +G+PA  LG+      N L   
Sbjct: 244  EEFGNILLKVNQDGSQVRLRDVAKIELGGENYDVIAKFNGQPASGLGIKLATGANALDTA 303

Query: 297  EGIRQLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVIWLCLGSLR 356
              IR  L +++   P G+ +   Y+T  F+  SIHEV++TLVEA+++V LV++L L + R
Sbjct: 304  NAIRAELKKMEPFFPSGLKIVYPYDTTPFVQISIHEVVKTLVEAIILVFLVMYLFLQNFR 363

Query: 357  SVLIAVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENVHRHI-EE 415
            + LI  +A+P+ +LG   ++ +FGFS+N LT+  MVLAIGL+VDDAIVVVENV R + EE
Sbjct: 364  ATLIPTIAVPVVLLGTFAILALFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEE 423

Query: 416  GKSPIAAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAGAVIVSGI 475
            G  P  A      +I G ++ + + L+AV+ P+   GG TG ++R+F++T+  A+ +S +
Sbjct: 424  GLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVL 483

Query: 476  VALTLSPVMSSLLLQPGQQ--HGAMAAIA---DRLFGTLSGVYGRVLAYTLAHRWISGGV 530
            VAL L+P + + +L+P Q+  HGA        +R+F   +  Y   +   L        +
Sbjct: 484  VALILTPALCATMLKPIQKGSHGATTGFFGWFNRMFDKSTHHYTDSVGNILRSTGRYLVL 543

Query: 531  ALLVCLSLPWLYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAERFALKLDQ--VMKSIA 588
             L++ + + WL++       P EDQ   L+  + P  A+ E  ++   ++    + K   
Sbjct: 544  YLIIVVGMAWLFVRLPSSFLPDEDQGVFLSMAQLPAGATQERTQKVLDEMTDYYLTKEKN 603

Query: 589  ETTDTWIINGTD----GPAASFGGINLSAWQARERSAAQVQAQLQQAV---ADIEGSSIF 641
                 + +NG      G       ++L  W  R     +V+A   +A+   + I+ + +F
Sbjct: 604  NVESVFAVNGFGFAGRGQNTGIAFVSLKDWSQRPGEENKVEAITGRAMGYFSQIKDAMVF 663

Query: 642  AFQVASLP--GSSGGLPVQMVLRSAQDYPELFQTM-EVLKQRARDSGLFAVVDSDLDYNN 698
            AF + ++   G++ G   Q++ ++   + +L Q   ++    A+   + + V  +   + 
Sbjct: 664  AFNLPAIVELGTATGFDFQLIDQAGLGHEKLTQARNQLFGMVAQHPDVLSGVRPNGLEDT 723

Query: 699  PVVKVRVDRAKAASLGISMQAIGESLGVLVGEQYLNRFALFGRSYDVIPQSIQDQRLTPA 758
            P  KV +D+ KA +LG+S+  I  +LG   G  Y+N F   GR   V   S    R+ P 
Sbjct: 724  PQFKVDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYIMSEAKYRMLPE 783

Query: 759  ALSRQYVRAEDGSLVPLATLVRLDIEVAPNRLLQFDQQNASTLQAIPAPGVSMGNAVAFL 818
             +   YVR  DG +VP +       E    RL +++   +  +     PG S G A+  +
Sbjct: 784  DIGNWYVRGSDGQMVPFSAFSTSRWEYGSPRLERYNGLPSMEILGQATPGKSTGEAMNLM 843

Query: 819  EQLTAELPPGFSHDWQSESRQYVQEGFALMWAFLAALVVIYLVLAAQYESLVDPLIILVT 878
            E+L  +LP G  +DW   S Q    G      +  +L+V++L LAA YES   P  +++ 
Sbjct: 844  EELAGKLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLV 903

Query: 879  VPLSICGALLPLALGWATLNIYTQIGLVTLIGLISKHGILMVAFANEIQVRDNLDRAAAI 938
            VPL + GALL       T ++Y Q+GL+T IGL +K+ IL+V FA ++  ++      A 
Sbjct: 904  VPLGVVGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEAT 963

Query: 939  VRAAQIRLRPVLMTTAAMTFGVLPLLFASGAGANSRFGLGVVIVCGMLVGTLFTLFVLPT 998
            + A ++RLRP+LMT+ A   GV+PL+ +SGAG+ ++  +G  ++ GM+  T+  +F +P 
Sbjct: 964  LEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVPV 1023

Query: 999  IYAWLAR 1005
             +  + R
Sbjct: 1024 FFVVVRR 1030