Pairwise Alignments

Query, 365 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 407 a.a., multidrug efflux system protein from Sinorhizobium meliloti 1021

 Score =  108 bits (271), Expect = 2e-28
 Identities = 98/372 (26%), Positives = 166/372 (44%), Gaps = 39/372 (10%)

Query: 13  VAGALAAAYALVG---SGSAPPAAAVWPATKVALATAEQVQLARQRFASGELEAVNQVQV 69
           +A ALA+   L G   +     AAA  P + VA+ T +   L       G + A    +V
Sbjct: 12  LAAALASVIFLAGCQKNEEQQAAAAAPPPSPVAVFTTKAEPLPITNELPGRITATRIAEV 71

Query: 70  AAEMPGRITRIAFESGQTVAAGQLLVQLNDAPEQALRVQLQARLRNADVVLQRSRK---- 125
              + G +    FE G  V  G +L +++ AP Q      +A L+ A  V+ ++++    
Sbjct: 72  RPRISGIVVERVFEQGTMVKEGDVLYRIDPAPFQVKVDSAEATLKRAQAVVDQAKRTADR 131

Query: 126 ---LRAMNAVSQELLDNAATAVDVARGELQHVEALIAQKAIR-------APFAGKLGIRR 175
              L+     + +  D+A  A+  A  ++   EA +A+  +        AP +G++G   
Sbjct: 132 QSRLKEAQVTAVQQYDDAIAALAQAEADVGIAEAGLAEAKLNLQYTNVTAPISGRIGRAL 191

Query: 176 VHQGQYLAAGETIVSLADISQLHVNFALGEQAAPEV-------HAGQVLA--------LT 220
           + +G  +   +   +LA I QL   +A   Q+A ++         GQ ++        L 
Sbjct: 192 ITEGALVNTNDP-QNLATIQQLDPIYADFTQSATDLIRLRKALKDGQWMSAKNEAEVQLI 250

Query: 221 VDAVRGQDFQARVVAVDPVV-STARLVQVQAALPNPQGQLQPGMYAGVRLDAAQPSTVLA 279
           +D       + R++  +  V +T   V ++   PNP   L PGMY  V++        + 
Sbjct: 251 LDDGTPYALKGRLLFSEAAVDATTGQVTLRGEFPNPNNDLLPGMYVRVQIQQGLEKDAIT 310

Query: 280 VPETAITYTAYGQT-VFVATQDPQHGTRVSRVQVTTGERWQGRVEITSGLTPGDRVVVSG 338
           VP+ A+     GQ+ V+V   D +   R   +  T GERWQ    +TSGL PG++V+V G
Sbjct: 311 VPQQAVQRNNAGQSQVYVVNADNKVEFRNVTLGRTVGERWQ----VTSGLKPGEKVIVEG 366

Query: 339 QLKLSDGMPVEP 350
             K+  G PV+P
Sbjct: 367 FQKVGPGAPVQP 378