Pairwise Alignments

Query, 365 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 373 a.a., acriflavin resistance protein from Sinorhizobium meliloti 1021

 Score =  115 bits (289), Expect = 1e-30
 Identities = 112/373 (30%), Positives = 170/373 (45%), Gaps = 46/373 (12%)

Query: 6   LLAWAGAVAGALAAAYALVGSGSAPPAAAVWPATKVALATAEQVQLARQRFASGELEAVN 65
           LL   G VAG    AYA       PPA  V PA  + L   E V L      +G++ AV 
Sbjct: 15  LLTTIGIVAGN---AYAQ----QPPPAVNVAPAAIMDLR--ESVDL------TGKVVAVQ 59

Query: 66  QVQVAAEMPGRITRIAFESGQTVAAGQLLVQLNDAPEQALRVQLQARLRNAD-----VVL 120
           +V + A + G + ++ FE GQ V+AG +L Q+ D   +A   ++   +  A+      VL
Sbjct: 60  KVDIRARVSGFLEKVNFEDGQKVSAGTVLYQVEDGAYRAALQEIDGSIAAAEAQRDLAVL 119

Query: 121 QRSR--KLRAMNAVSQELLDNAATAVDVA-------RGELQHVEALIAQKAIRAPFAGKL 171
           +R R  +L A N V+Q  LD A   V  A       +G  Q+ E  ++   I APF G +
Sbjct: 120 ERDRAQRLIATNTVAQATLDTANAQVKKAEADILRLKGSKQNAELNLSYTKILAPFDGVV 179

Query: 172 GIRRVHQGQYLAAGE-TIVSLADISQLHVNFALGEQA----APEVHAGQVLA---LTVDA 223
           G+  V  G  +A    ++V+L  +  ++V F +           V  G++ +   +++  
Sbjct: 180 GLTTVDVGALVAPDSGSLVTLTRLDPIYVEFPVATSLYFSYRERVEKGEMSSGANVSITL 239

Query: 224 VRGQDFQARVVAVDPVVSTAR----LVQVQAALPNPQGQLQPGMYAGVRLDAAQPSTVLA 279
             G D+  +   +D V ST       V V+A  PNP G L  G    V L+ + P  VLA
Sbjct: 240 PNGTDYPEK-GTIDFVASTVSQGTDTVTVRAEFPNPGGTLLDGTLVRVVLEQSDPQDVLA 298

Query: 280 VPETAITYTAYGQTVFVATQDPQHGTRVSRVQVTTGERWQGRVEITSGLTPGDRVVVSGQ 339
           VP+ A+     G   FV   D      + RV V+   R  G+  +  GL  G+ V+  G 
Sbjct: 299 VPQQAVQRDQQG--AFVMVVDANSKVELRRVDVSRSSR--GQAVVAKGLKEGENVITEGV 354

Query: 340 LKLSDGMPVEPVA 352
            K+  G+ V+ VA
Sbjct: 355 GKVRPGIVVDAVA 367