Pairwise Alignments

Query, 359 a.a., putative isomerase from Pseudomonas putida KT2440

Subject, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (438), Expect = 8e-48
 Identities = 131/384 (34%), Positives = 184/384 (47%), Gaps = 37/384 (9%)

Query: 3   RIPCVLMRGGTSKGPFFHAWDLPANV----VERDELLINLMGSG--HELEIDGIGGGSPQ 56
           RIP   MRGGTSKG FF   DLP         RD LL+ ++GS   +  +IDG+GG +  
Sbjct: 9   RIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGGATSS 68

Query: 57  TSKVAIISPSLHADADVDYLFVQVMVAQRRVDTAPNCGNMLCAVGPFAIEQGLVKGQ--- 113
           TSK  I+S S   D DVDYLF QV + +  VD + NCGN+  AVGPFAI  GL+  +   
Sbjct: 69  TSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPAECIP 128

Query: 114 -EGKTLVRIRNLNTGTFVNSLVETPGGIVRYEGRTAIDGVPGTAAPVHLTFLDAVGSKTG 172
             G   V++  +N    +   V    G V+  G   +DGV   AA V + F+D     +G
Sbjct: 129 HNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDP-ADDSG 187

Query: 173 KLFPTGKAQD-----VIDGVPVTCIDMAMPMMVVEASQLGVSGSETPAQLDANSALLERL 227
            +FPTG   D      I  +  T I+  +P + V+A  LG  G+E    ++++   L + 
Sbjct: 188 AMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSDPQALAKF 247

Query: 228 EALRLKAGKAMGLGD-----VSGMVIPKPVLVSKPRY------------DGTLQVRYFMP 270
           E LR      MGL +      +    PK   VS  +                L VR    
Sbjct: 248 ETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDLLVRALSM 307

Query: 271 HNCHRALAITGAVGLATACVSPGTVIADLLGEGAQQLAQVRLEHPSGGIDV-ALTRSGAE 329
              H A+  T AV +A+A   PGT++   L  G  +   V   HPSG + V A  + G +
Sbjct: 308 GKLHHAMMGTAAVAIASAAAVPGTLVN--LAAGGGERTSVTFGHPSGTLKVGAKAKQGKQ 365

Query: 330 GQTIQASVV-RTARRLFSGFVYAP 352
           G  I+ +++ R+AR L  G+V  P
Sbjct: 366 GWQIERAIMSRSARILMEGWVRVP 389