Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (350), Expect = 8e-38
 Identities = 88/296 (29%), Positives = 146/296 (49%), Gaps = 5/296 (1%)

Query: 9   ISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRMRP 68
           + ++DLNLL VFD +++  +VS+AA++L +T   VS  L+RLR+Q+GDPL +R GR ++P
Sbjct: 4   LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63

Query: 69  TPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLELL 128
           T  AL +   +   L  I   L T  GF+P  S R+  I    + + + +PPLL ++  +
Sbjct: 64  TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123

Query: 129 APNVRIDVVHLAPN--LPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQHP 186
           AP++ +++     +   P++ L   + DL L                 E L +   + HP
Sbjct: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183

Query: 187 HLAPGQALDLDAFLGLRHIWVHGGQTRGMVDQWLAEQGL-TRQIAYTTPNYLQAAHLAAA 245
            L  G  L  + F   +H  +   +    +   L +Q L  R++ Y + + L     A+ 
Sbjct: 184 RL--GSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASV 241

Query: 246 TDMCVVLPRQLAQQFAHLLPLAVHELPFALEPFELEVVHLSHRQHDPALAWLVEQI 301
           TD+    P++LA  +A  L L +  LPF +      +     +Q D  L WL EQI
Sbjct: 242 TDLLCFTPKRLADMWAEKLGLQIQPLPFEIRSVPTFMCWHKAKQQDKGLIWLREQI 297