Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (397), Expect = 3e-43
 Identities = 103/299 (34%), Positives = 147/299 (49%), Gaps = 7/299 (2%)

Query: 7   MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 66
           M + N DLNL  VFD +  E+N++RAAERL +TQP VSNAL+RLR  L DPL +R  + M
Sbjct: 1   MRLQNVDLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAM 60

Query: 67  RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 126
            PTP A  + G +R AL+ +  ++  GD F+P  +    ++ + D  E+  +P LLA L+
Sbjct: 61  MPTPVAENMIGQVREALKLLSSSMHLGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQ 120

Query: 127 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQHP 186
           + AP + I    ++     +    G LDL +            HP         +R+ HP
Sbjct: 121 VHAPRLSISSYPVSREEMLKEFVSGRLDLAIDAPIVTHPDLYHHPLVTVPYVCLVRKDHP 180

Query: 187 HLAPGQALDLDAFLGLRHIWVHG-GQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHLAAA 245
            +  G  L L+ +L L H+ V    Q  G VD  L   G  R I   T ++  A  L A 
Sbjct: 181 EV--GDTLSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQAAPKLVAE 238

Query: 246 TDMCVVLPRQLAQQFAHLLPLAVHELPFALEPFELEVVHLSHRQHDPALAWLVEQILTL 304
           T++   +P  LA+       L V +LPF +EP E  +        D A  WL E I  L
Sbjct: 239 TNLATTVPESLAKN----TDLKVLKLPFEVEPIEWHLYWHRSADQDNANRWLREFITAL 293