Pairwise Alignments

Query, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas stutzeri RCH2

 Score =  232 bits (591), Expect = 3e-65
 Identities = 165/537 (30%), Positives = 272/537 (50%), Gaps = 41/537 (7%)

Query: 2   NLGTLSSRSARYWPERLAVIDRHTRLTFAQLEQRANQLASALLAQ-GIATGEHVAILAPN 60
           N+  +  +S   + ++ A  +    LT+ +L + +   A+ L     +  G+ +A+  PN
Sbjct: 25  NIQAVLKQSCERFADKPAFSNLGKTLTYGELYKLSGDFAAYLQQNTDLQPGDRIAVQLPN 84

Query: 61  RAELVEAEVAFYKAGLVKVPVNARLAPDEVIQVLNDACSVALIA---DAQLAQALLARR- 116
             +         +AGL+ V  N      E+    NDA + AL+     A LA+ +L +  
Sbjct: 85  LIQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFNDAGAKALVCLANMAHLAEEVLPKTG 144

Query: 117 ------QEV-----PALRLIVTLGERGGDITYAAL-----------LAQGSSQPISCDLP 154
                  EV     P  R++V    +       A            LA G  +P+   LP
Sbjct: 145 IKHVVITEVADMLPPLKRMLVNAVVKHVKKMVPAYSLPKAVKLNDALALGRGKPVREALP 204

Query: 155 -DDALAVLHYTSGSSGVLKAAMLSVGNRKALIRKSLASPTRRAAPG-DVMAHVGPITH-- 210
             D +AVL YT G++GV K AML+  N  A + +  A        G +V+    P+ H  
Sbjct: 205 KSDDVAVLQYTGGTTGVAKGAMLTHRNIVANMLQCKALMGSNLNDGSEVLIAPLPLYHIY 264

Query: 211 ASGMQLMPLLAVGACNLLLERYDD-QLLLETIQREGVTRLFLVPAMINRLVNFPDVERYD 269
           A     M ++  G  N+L+    D   +++ + +   +    +  +   L N  D  + D
Sbjct: 265 AFTFHCMAMMLSGNHNILISNPRDLPAMIKDLGKYRFSGFVGLNTLFVALCNSEDFRKLD 324

Query: 270 LSSLRLVMYGAAPMAPALVKRAIEVFGPILAQGYGAGETCSLVTVLTEQDHLCEGGDYRR 329
            S+L++ + G   +  A  +R  +V G  + +GYG  ET  + +V    +H+       +
Sbjct: 325 FSALKVTLSGGMALQLATAERWKQVTGCPICEGYGLTETSPVASV-NPIEHI-------Q 376

Query: 330 LASCGRCYFETDLRVVNDHFQDVQPGEVGEIVVKGPDIMQGYWRAPHLTAEVM-RDGYYL 388
           L S G     T  +V+ND  QD+  GE+GE+ +KGP +M+GYW+ P  T EV+   G++ 
Sbjct: 377 LGSIGIPVPSTQFKVINDDGQDLAQGEIGELCIKGPQVMKGYWQRPEATDEVIDAQGWFK 436

Query: 389 TGDLATVDEQGYVFIVDRKKEMIISGGFNIYPSEVEQVLYSMPQVFEAAVVGVPDEQWGE 448
           TGD+  + E GY+ IVDRKK+MI+  GFN+YP+E+E VL S+P V ++A +GVPDE+ GE
Sbjct: 437 TGDIGVIQEDGYIRIVDRKKDMILVSGFNVYPNELEDVLASLPGVLQSAAIGVPDEKSGE 496

Query: 449 AVRAVIVLKPGMALQEQDVIEHCAQALAGFKKPRAVDFVSELPKNPNGKVVRRLIRD 505
           A++  +V+KPG +L ++ V++H    L G+K+P+AV+F   LP    GK++RR +RD
Sbjct: 497 AIKLFVVVKPGESLTKEQVMQHMHDNLTGYKRPKAVEFRDSLPTTNVGKILRRELRD 553