Pairwise Alignments

Query, 572 a.a., conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat from Pseudomonas putida KT2440

Subject, 693 a.a., TPR repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  231 bits (590), Expect = 6e-65
 Identities = 153/522 (29%), Positives = 250/522 (47%), Gaps = 14/522 (2%)

Query: 8   WLRPLWLLAVPVLGWLLYKLWHRRKRAGRWQMILPPAFHGVLLGGGSGSTSKLPWVALGL 67
           +LRP WLLA+  L  LL+    +R +A  W   + P    VL+ G   S  K     +  
Sbjct: 4   FLRPEWLLALIPLALLLWLRKRQRHQASSWNRYIAPHLAKVLVSG-QASNKKQHLGLIAF 62

Query: 68  AWLLVILALLGPSWQRLEESRQRPADPLVILLELTPQMLAEDSPPNRLEQARRKILDLLE 127
            WL+ +LAL GP+  + +          VI+++++  M A D  PNRL QA+ K  DL++
Sbjct: 63  IWLVSVLALSGPALTKQQLPVFEANLGRVIVMDMSLSMYATDLAPNRLTQAKFKATDLIK 122

Query: 128 HRRDSQTALVVYAGSAHTLVPLSDDLATTRNLLEAIDPSIMPKPGQRADLAVQKGLALLA 187
             ++ +T LV YAG A T+ PL+ D +T  NLL  + P IMP  G     A+ +   LL 
Sbjct: 123 SLKEGETGLVAYAGDAFTISPLTRDKSTLLNLLPTLSPEIMPVLGSNLPAALDQAKQLLV 182

Query: 188 QSGLGQGRLLLVGSALSAAERQGITQALGRQGPSLLMLGIGSREGAPVRQANGEYLKDDQ 247
           Q G  +G ++L+   ++  +       L      L ++ +G+ +GA +R  +G+ ++D  
Sbjct: 183 QGGHLKGEIILLADGVNPDQIGEAKSILDDTQYRLSIIAMGTNQGAAIRLPDGQLMRDQS 242

Query: 248 GGILLPRLDSASLKGFISGTGGRYRHARIDDLDLRGLGLFDNPRSGRNDGQTL--QLDSW 305
             +++ + D + L   I  +GG+    R D  DL  L       S  +D +T   Q ++W
Sbjct: 243 DQVVVSQTDLSQLNSLIGNSGGKLFAYRADGKDLESL---TQSLSQESDAKTSDRQGEAW 299

Query: 306 ADQGYWLLIPLLLLAACAGRRGWLFCLPLLLALPQP-GQAFELNDLWLRPDQQGQKLLEQ 364
            D G +L + LLL A  + R  +     L++  P P  QA      +   DQ+  +  + 
Sbjct: 300 QDLGPYLALLLLLPALLSFRHAFAALACLVILAPSPEAQAASWQHPFSTDDQRAMQAYQA 359

Query: 365 NRPASAARHFQNPQWRGMALYQAGDYAGAAEAFSQGDTAAAHYNRGNALARSGELEAALD 424
                AA  F +PQW+  +LY+ GDY  A + F Q D+A+  +N+GN+L +  +L+ A++
Sbjct: 360 QDFQGAAEQFTSPQWKAASLYKNGDYQEALKLFEQDDSASGLFNQGNSLMQLNDLDKAIE 419

Query: 425 AYEQALERQPDLQAALDNQALVQQLLQQREAKAEE-------QPPGSDAQDTPGSETEGN 477
            Y+QAL++ P L  A  N  L +QL QQ++A  ++              QD    ++   
Sbjct: 420 RYQQALKKDPQLTQAEQNLELAEQLKQQQQASQDQGQSDQKKSEQNQSDQDQSNQDSNKQ 479

Query: 478 SSSASSPAQGTPGDDQQASPEQPGESSSNSQAAPGNQAGSDD 519
             S    A    G  Q    +Q G+ S   Q+   N    D+
Sbjct: 480 DKSQQDGAGQNQGQQQGQGDQQSGQGSRGQQSQGQNGQQEDE 521