Pairwise Alignments

Query, 412 a.a., Exonuclease SbcD from Pseudomonas putida KT2440

Subject, 400 a.a., exonuclease sbcCD subunit D from Klebsiella michiganensis M5al

 Score =  178 bits (452), Expect = 2e-49
 Identities = 133/394 (33%), Positives = 197/394 (50%), Gaps = 40/394 (10%)

Query: 1   MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ 60
           MR+ HTSDWHLGQ+ + + R  EH  FLDWLL   +    DA+++AGDIFDT +PP  A+
Sbjct: 1   MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLASAQEHDVDAIIVAGDIFDTGSPPSYAR 60

Query: 61  ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA 120
           E    F+VQ   QQ    +V++AGNHDS + +     ++  L+T  +             
Sbjct: 61  ELYNRFVVQL--QQTGCRLVVLAGNHDSVATLNESRDILAFLKTTVVANA--------GH 110

Query: 121 ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLG-------DDYLQGITQVHQQLIAAA 173
              ++PL +G    A +C  +PFLRP E+   Q G          L  I+  +QQ    A
Sbjct: 111 APFILPLRDGT-PGAVFC-PVPFLRPRELVTSQAGHSSGEKQQQLLNAISDYYQQQYQQA 168

Query: 174 LKKRKKDQALIAISHAHMAG-GAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKP 232
            + R  D+AL  I+  H+   GA   D+ R + IG  +A PA  F  A  Y+ALGH+H+ 
Sbjct: 169 CELR-GDRALPIIASGHLTTVGASKSDAVREIYIGTLDAFPANRFPPA-DYIALGHIHRA 226

Query: 233 QKVNREERIRYSGSPIPLSFAEINYPHQVLEVELDGNGLVSVEPRPVPRAVALQRVGPAP 292
           Q V   E IRYSGSPI LSF E      V  V      L  V P  VP           P
Sbjct: 227 QVVGGCEHIRYSGSPIALSFDETGKSKSVNLVTFSAGRLTDVTPLIVPIT--------QP 278

Query: 293 LGELLQQLADLPV-VDLLEDPNRQP--WLEVRVLLDEPQPDLRQQIETALEGKAVRLIRI 349
           L  L    A +   ++  ++ ++QP  WL++ +  DE   D++++I+   E   V ++ +
Sbjct: 279 LAVLKGDFASVSAQLNQWQNNDQQPAAWLDIEITSDEYMHDIQRKIQAQTETLPVEVLLV 338

Query: 350 SAEYAGRNNAEDDDLAFVE---LAQMTPQDLFSR 380
               + R    D  LA V+   L+++  +D+F+R
Sbjct: 339 RRSRSQR----DRILAGVQRVTLSELQVEDVFAR 368