Pairwise Alignments

Query, 319 a.a., adhesin-associated BNR repeat protein (from data) from Pseudomonas putida KT2440

Subject, 349 a.a., photosystem II stability/assembly factor from Synechococcus elongatus PCC 7942

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 14/211 (6%)

Query: 53  STWTQARVPTRQLLTAVFFLDDKR-GWAVGHDAQILASTDGGATWSKQFEDLAREAPLLD 111
           S W    + T + +  + F  +K+ GW VG D  +  + DGG +WS++  DL     L  
Sbjct: 40  SPWQVIDLGTEKTILDIAFTSNKQHGWLVGTDLALYETLDGGQSWSERALDLDETYRLNS 99

Query: 112 VTFLDAQHGFAVGAYGALLETTDGGQHWQDV--AERLDNPDQLHLNGIAQVRDAGLFIVG 169
           ++F     G+ VG    +L TTDGG++W  +  +E+L     L    +  +      +  
Sbjct: 100 ISF-KGDEGWVVGQPSLMLHTTDGGKNWLRIPLSEKLPGSPLL----VTALGKGEAEMAT 154

Query: 170 EQGGMFRSTDNGQTWAKVQGPYEGSLFGVIGTARPQTLLAYGLRGNLFRSSDFGD-NWQP 228
           +   ++RS D G++W + Q P    +   +  +R    LA   RGN + +   GD  W P
Sbjct: 155 DVAAIYRSRDGGKSW-QAQVPDAAGVARSVSRSRDGRYLAVSARGNFYSTWKPGDTTWTP 213

Query: 229 IELKAARGTLEFGLAGATLVDDGTLVLVGNG 259
            +  ++R     G       DD T ++   G
Sbjct: 214 HQRTSSRRLQLMGFG----PDDRTWLIARGG 240



 Score = 43.9 bits (102), Expect = 6e-09
 Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 23/195 (11%)

Query: 3   ADSAQAAAADQYSTESAKASQSLLIDATHAGK--------RLVVVGDRGHILFSDDQG-S 53
           A+ A   AA   S +  K+ Q+ + DA    +        R + V  RG+   +   G +
Sbjct: 150 AEMATDVAAIYRSRDGGKSWQAQVPDAAGVARSVSRSRDGRYLAVSARGNFYSTWKPGDT 209

Query: 54  TWTQARVPTRQLLTAVFFLDDKRGWAVGHDAQI-LASTDGGATWSKQFEDL--------- 103
           TWT  +  + + L  + F  D R W +    ++  + T     W +  E+          
Sbjct: 210 TWTPHQRTSSRRLQLMGFGPDDRTWLIARGGRLQFSKTSQIDNWEEMLEESDAWGTAIEP 269

Query: 104 AREAP--LLDVTFLDAQHGFAVGAYGALLETTDGGQHWQDVAERLDNPDQLHLNGIAQVR 161
            R A    LD+ +   Q  +  G  G LL + DGG+HWQ        P  L+       +
Sbjct: 270 ERNAGWGFLDLAYRSKQEIWLSGGSGTLLVSEDGGEHWQRDRVIAKLPSNLYTIKFFAPK 329

Query: 162 DAGLFIVGEQGGMFR 176
               F++G++G + R
Sbjct: 330 QG--FVLGQRGLLLR 342