Pairwise Alignments

Query, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 286 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Pseudomonas stutzeri RCH2

 Score =  332 bits (850), Expect = 8e-96
 Identities = 163/294 (55%), Positives = 207/294 (70%), Gaps = 12/294 (4%)

Query: 1   MNIIEVMRLPLSVDLSGFVHLLQRLQVPHRVSEEGDAQVLWAPDTLAEDVLQLYQRYPDG 60
           + + E +RLPLS DLSGF+ LL+RL+VP RVSEEGD QVL  P  + E V  LY R+P G
Sbjct: 3   VEVSEALRLPLSEDLSGFIALLRRLRVPCRVSEEGDQQVLRVPVEVVEQVRDLYARHPHG 62

Query: 61  NADLPATADPVGAGAPANAPTQPSLAAQAKACKITTLTLLLCFIVAGLTGLGDNFTTISW 120
           +       D V    P     +    A  +A  +T   L++  +VA +T LG+NF TI W
Sbjct: 63  D-------DSVVIEQPRR---RGGFVAALRASPLTAAVLVITLVVAAITMLGENFATIRW 112

Query: 121 FTFLDFRVQGDYLYFSPLAQSLDEGQWWRLVSPMLLHFGVLHLAMNSLWYWELGKRIELR 180
             F+DFR+ G+Y YF+ L Q+L  GQWWRL++P+ +HFG+LHLAMNS+W+WELG+RIE  
Sbjct: 113 LNFVDFRIDGEYAYFASLEQTLAAGQWWRLITPIFVHFGILHLAMNSMWFWELGRRIEAL 172

Query: 181 QGPWALLGLTLLFSLVSNLAQHYTSGPSLFGGLSGVLYGLLGHIWLYQWLAPDRYFNLPK 240
           Q  W LL LTLLF LVSN AQ+   GP +FGGLSGVLYGLLGH WLYQ LAP+  + LP 
Sbjct: 173 QRAWMLLALTLLFGLVSNFAQYLFGGPGIFGGLSGVLYGLLGHCWLYQKLAPNEAYRLPP 232

Query: 241 GVLVMMLIWLVVCLTGVVGTLGLG--QIANAAHVGGLLIGCLTGLLGGALARRK 292
           GV+V+ML+WLV+CLTGV+  L  G   IANAAHVGGL+ GC+TG++GG LARR+
Sbjct: 233 GVVVLMLVWLVICLTGVIEVLSFGALAIANAAHVGGLVAGCVTGVIGGTLARRR 286