Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 332 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (306), Expect = 1e-32
 Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 20/326 (6%)

Query: 24  RELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAALGL-----RMGR 78
           R  G D  P+L++ G+    L E  AR++  ++  +  A     G+  LG      + G 
Sbjct: 19  RRQGFDYVPVLQQLGISPELLDEPRARIAPEQFARLLQALWLALGDEYLGFGRAASKPGT 78

Query: 79  LSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLRFY-SIS 137
            + + H  +         TLG+A +  L F  L+            +A+G  +R     S
Sbjct: 79  FAMMCHALI------HCRTLGKALQRGLLFYSLFP----DAPSLTLEAEGERVRLVLDDS 128

Query: 138 PYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPVQFAAD 197
              D + F+ +SLL  W    + L G  +  E+    +  P++ A Y  L S P+ F A 
Sbjct: 129 TLWDPDHFLTESLLVVWHRLASWLIGQRIGLEQATFGYTKPAHGAEYDLLFSCPLVFEAR 188

Query: 198 GNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRV-RSLGERITHLLGPLLNGGR 256
            + L      L +        T +H L+   A+LL R     SL  ++  LL    +  R
Sbjct: 189 SSSLLFHSRYLGMPLLQD-ERTLKHFLERSPADLLSRPDDGHSLSSQLRRLLSR--DTAR 245

Query: 257 EPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAYLLG 316
            PDL+ VA HL +   TLRR L EEGT F++L ++ RRD+A  ++    L+  +IA  LG
Sbjct: 246 WPDLDTVAGHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADLSLQQIAEQLG 305

Query: 317 FASAEAFQRAFKRWTGLTPGEFRRSQ 342
           F+   AF RAFK+WTGLTPG +R  +
Sbjct: 306 FSEPSAFHRAFKKWTGLTPGAYREQE 331