Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 347 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (292), Expect = 6e-31
 Identities = 89/336 (26%), Positives = 147/336 (43%), Gaps = 4/336 (1%)

Query: 4   PRVRLGELSVGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAA 63
           P   L  +S   +Q L+E + + G D   L R  G     L +   R+S  + + M   A
Sbjct: 8   PTYELALVSPFLLQTLAEVVADKGFDAASLCRGLGFGLDDLQDPAQRISHRQAVVMIQRA 67

Query: 64  IEMSGEAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFE 123
           +++  +  LGL +G  + L   GL G   +   TL +A    +R++  +       +  E
Sbjct: 68  LKLLPDQGLGLWVGDRNVLGTLGLLGHVLSLCETLRDAFALGVRYQ--HTTGGIAVTSVE 125

Query: 124 EDAQGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAAR 183
           E      +      P+ +   F V+   A  +     LAG   +   +E   AAPSYA  
Sbjct: 126 EATGRIMVEATCRLPFAEIQVFAVEEFFASLMVYGRALAGPDFKPLAVEFMHAAPSYAQE 185

Query: 184 YQPLCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGER 243
           YQ +    V F    N++ +    L +  P H P   +  L L E E  +  +   L + 
Sbjct: 186 YQWILGPDVHFGCRHNRMLIDVRWLDMRLPNHHPLALRQALALLEQEATEVHQKIDLIQT 245

Query: 244 ITHLLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRD 303
           +   +   L  G    +E++A  L + S TLRR+L+E    F  LL + RR      + +
Sbjct: 246 VERAIARDLTRGSH--IEKIAGDLNMSSRTLRRRLSEHNLTFETLLEQVRRSRTLNLLAN 303

Query: 304 TALAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFR 339
             L+   I   +G++   +F+RAF+RWTG++P  FR
Sbjct: 304 PELSIERITEEVGYSDVRSFRRAFRRWTGMSPSAFR 339