Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 343 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 92/336 (27%), Positives = 151/336 (44%), Gaps = 26/336 (7%)

Query: 16  VQPLSEALREL---GHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAAL 72
           +Q + EAL +    G   + +L + G+D   L +A AR+    Y  +         +   
Sbjct: 14  IQLVREALLQSCAPGAATDEVLSKVGIDPALLDDAQARVPAHAYARLWRLLARRLDDEFF 73

Query: 73  G-----LRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFE---- 123
           G     L+ G L+ L    +A  T A   T G    +L+  E L A   R  S  E    
Sbjct: 74  GMDPRKLKSGSLAFLCQCAMAQPTLASGLTAGLGFLSLM-LEHLPAQWVRQQSLAEIVLL 132

Query: 124 EDAQGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAAR 183
           ED Q     F        +  +++   +A WLA      G  +    +E+   AP +   
Sbjct: 133 EDDQEPRRAF------TYFTYWMIVHGVACWLA------GRRIPILSVELRCPAPDFCDD 180

Query: 184 YQPLCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGER 243
           Y+ + S  ++F     ++  +   L L    +     + L Q     L++    +SL  R
Sbjct: 181 YRVMFSQNLRFDRPRTRMIFAAECLDLPIRRNADELKRFLAQAPANILVKYRDPQSLASR 240

Query: 244 ITHLLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRD 303
           I H L  L    + P+ E +A  L + + TLRR+LAEEG  ++ L +  R+DLA T++ +
Sbjct: 241 IRHDLRQL-PAEQWPETEALAQQLCVSASTLRRRLAEEGQTYQGLKDSVRKDLAITWLAE 299

Query: 304 TALAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFR 339
            +++F EI   LGFA A +F +AF++W+G  PG +R
Sbjct: 300 PSISFVEITSRLGFADASSFYKAFRKWSGSNPGHYR 335