Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 337 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 81/318 (25%), Positives = 133/318 (41%), Gaps = 24/318 (7%)

Query: 28  HDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAI---EMSGEAALGLRMGRLSRLAH 84
           H  E L +  GL    L    A+L+      + +A      ++ +  +G R+G   ++  
Sbjct: 37  HHAEQLCQEIGLGLNEL----AKLNFVYVWQVDYAMAFLGNLADDPQIGARLGETYKVEE 92

Query: 85  TGLAGVTAAQAPTLGEAARTLLRFEPLYAA-NYRGHSRFEEDAQGAWLRFYSISPYNDYN 143
             L     A+  TLGE    ++    L  + +    S  E      WL    IS    Y 
Sbjct: 93  LALIWPYLAKCQTLGECLEFVIAHPELVGSVSDTLVSHGERSLYFRWLNTAKISA--PYF 150

Query: 144 RFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARY-QPLCSTPVQFAADGNQLR 202
                + +   LA   +L G  V  ER+++  A P++ + +    C   V F  +  +  
Sbjct: 151 SLQFQNSVCSMLALARQLTGQMVTLERVQL--ATPAHDSEFLAAFCQADVGFDGEFFEWA 208

Query: 203 LSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHLLGPLLNGGREPDLEE 262
           +S   L L      P  +   L   + + L  T   SL E++  +L    +    P LE 
Sbjct: 209 ISHEMLSL------PVVYDFSLLQLDKQALHDT---SLIEKVLAILNQ--DFPNNPKLES 257

Query: 263 VALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAYLLGFASAEA 322
           +AL L +   TLRR LA  GT ++ L+++ R   A   I     +  +IA ++GF     
Sbjct: 258 MALRLNMSDRTLRRHLASAGTSYQKLVDQVRCQTAIGLIVQGDKSIVDIADIMGFGDVSH 317

Query: 323 FQRAFKRWTGLTPGEFRR 340
           F+++FK W GL PG+F R
Sbjct: 318 FRQSFKHWLGLPPGQFIR 335