Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 361 a.a., DNA-binding domain-containing protein, AraC-type from Dechlorosoma suillum PS

 Score =  110 bits (274), Expect = 7e-29
 Identities = 104/357 (29%), Positives = 149/357 (41%), Gaps = 35/357 (9%)

Query: 1   MARPRVRLGELSVGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMG 60
           + RPR  +   ++GFVQ +   +   G D  PLL R G+    L     R+ + RY  + 
Sbjct: 11  LPRPRATV---AMGFVQGMLAGVTARGGDAGPLLERAGIGREVLHRPDVRVPVERYAALY 67

Query: 61  HAAIEMSGEAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHS 120
           +  I   G+    L    L       L   +   APTLGEA +   RF  L   +   H 
Sbjct: 68  NLLIAELGDEGFALFSTPLPPGTFEFLCR-SVISAPTLGEALQRSTRFLGLVLHDLSVHL 126

Query: 121 RFEEDAQGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSY 180
                 Q A LR     P      F  + LL       + LAG  +  ER++  +  P++
Sbjct: 127 ESGSAGQ-ALLRIREERPLAVGRVFAFEWLLRLLHGLASWLAGRSIVLERVQFPYPRPAH 185

Query: 181 AARYQPLCSTPVQFAADGNQLRLSRATLQL--------------ANPGHCPSTWQHLLQL 226
           A  Y  + +    FAAD      S   L L               +PG   + ++     
Sbjct: 186 ADDYALIYTAQSDFAADSLAASFSATLLDLPIRRDEAALASFLEGSPGKITTLYR----- 240

Query: 227 CEAELLQRTRVRSLGERITHLLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFR 286
                    R R +  R+  +L   L     PDL+ VA  L L   TL R+L EEG+ FR
Sbjct: 241 ---------RDREMVLRVRDILRAALP--ELPDLDGVARQLNLSPRTLHRRLEEEGSSFR 289

Query: 287 DLLNETRRDLAETYIRDTALAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFRRSQR 343
            + +  RRDLA + +  T+   G+IA  LGFA   AF RAF  WTG +P ++R+  R
Sbjct: 290 AIKDALRRDLALSRLTKTSQPLGQIAADLGFADPSAFFRAFVSWTGTSPSQYRKRLR 346