Pairwise Alignments

Query, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

Subject, 284 a.a., tRNA pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  453 bits (1166), Expect = e-132
 Identities = 213/279 (76%), Positives = 241/279 (86%)

Query: 6   IDTATAESAAEGYSRIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPISVVC 65
           ID   AE AA+G+ RIALGVEYKG+RYRGWQRQASGV +VQ+ LE ALSKVA+ P+S+ C
Sbjct: 4   IDNPAAEMAADGFFRIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVSLHC 63

Query: 66  AGRTDAGVHGCGQVVHFDTRAVRDERAWTMGTNFNLPHDISVVWSRPMPADFHARFKACA 125
           AGRTDAGVH CGQVVHFDT+  R  +AW MG N NLPHD+SV W++ MPA FHARFKA A
Sbjct: 64  AGRTDAGVHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIA 123

Query: 126 RRYRYVIYNDPIRPAHLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAFRASQCQAKSPI 185
           RRYRYVIYND IRPAHL EE+TWNHRPLDV+RMAEAAQYL+G HDFSAFRA QCQAKSPI
Sbjct: 124 RRYRYVIYNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLVGVHDFSAFRAGQCQAKSPI 183

Query: 186 KHIYHLRVTRHGQMIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEGRNRRE 245
           K ++HLRVTRHG+MIVLD+RA+AFLHHMVRNIAGVLM IGAGERPV W +EVL+ R RR 
Sbjct: 184 KELHHLRVTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWIKEVLDSRVRRS 243

Query: 246 GGVTAHPYGLYLVQVEYPEAFALPKRYIGPHFLSGYEAL 284
           GGVTAHP+GLYLVQVEY + F LP+RYIGPHFL+G+  L
Sbjct: 244 GGVTAHPFGLYLVQVEYRDEFELPERYIGPHFLTGFSEL 282