Pairwise Alignments

Query, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

Subject, 247 a.a., tRNA pseudouridine synthase A from Sinorhizobium meliloti 1021

 Score =  174 bits (441), Expect = 2e-48
 Identities = 102/248 (41%), Positives = 143/248 (57%), Gaps = 8/248 (3%)

Query: 20  RIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPISVVCAGRTDAGVHGCGQV 79
           R  L VEY G+ Y GWQRQ +G PSVQ A+E+A+  +  E +S+  AGRTD+GVH  GQV
Sbjct: 3   RYRLTVEYDGSDYVGWQRQDNG-PSVQGAIEKAVLSLTRETVSIRGAGRTDSGVHARGQV 61

Query: 80  VHFDTRAVRDERAWTMGTNFNLP-----HDISVVWSRPMPADFHARFKACARRYRYVIYN 134
            H D    R+ +++T+    N         +S++     P DF ARF A  R Y Y I +
Sbjct: 62  AHLDL--TREWKSYTLQNALNAHLALAGERVSILDVAEAPGDFDARFSAIRRHYLYRIIS 119

Query: 135 DPIRPAHLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAFRASQCQAKSPIKHIYHLRVT 194
                A  A    W  +PLD D M EAAQ L+G HDF+ FR++ CQA SP++ +  L VT
Sbjct: 120 RRSPLALEARRAWWVPKPLDHDAMHEAAQRLVGHHDFTTFRSAHCQATSPLRTLDRLDVT 179

Query: 195 RHGQMIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEGRNRREGGVTAHPYG 254
           R G++I +   A +FLH+ +R+ AG L  +G G+      +  LE R+R+  G  A P G
Sbjct: 180 RAGELIEIRATAQSFLHNQIRSFAGSLKLVGEGKWTPDDLQAALEARDRKACGPVAPPDG 239

Query: 255 LYLVQVEY 262
           LY ++V+Y
Sbjct: 240 LYFMRVDY 247