Pairwise Alignments

Query, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

Subject, 278 a.a., Pseudouridylate synthase (NCBI) from Rhodospirillum rubrum S1H

 Score =  188 bits (477), Expect = 1e-52
 Identities = 110/253 (43%), Positives = 141/253 (55%), Gaps = 2/253 (0%)

Query: 20  RIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPISVVCAGRTDAGVHGCGQV 79
           R  L VEY G  Y GWQRQ +G P++QQ+LE+A  ++      V  +GRTD+GVH  GQV
Sbjct: 3   RYRLTVEYDGRGYCGWQRQDNG-PTIQQSLEEAAFRLCGVATRVHGSGRTDSGVHALGQV 61

Query: 80  VHFDTRAVRDERAWTMGTNFNL-PHDISVVWSRPMPADFHARFKACARRYRYVIYNDPIR 138
            H D              N +L P  I+V+ +  +  DFHARF A  R YRY I N    
Sbjct: 62  AHLDLPRAYGAATVMKALNAHLRPQPIAVIDAAEVAEDFHARFSAEERSYRYRILNRIAP 121

Query: 139 PAHLAEEVTWNHRPLDVDRMAEAAQYLLGTHDFSAFRASQCQAKSPIKHIYHLRVTRHGQ 198
           P      V W  RP++   M EAAQ L+G HDFS+FRA++CQA SP+K +  LRVTR G 
Sbjct: 122 PTLDQGRVWWVARPMEAAIMDEAAQVLVGRHDFSSFRAAECQADSPVKTLSELRVTRVGD 181

Query: 199 MIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEGRNRREGGVTAHPYGLYLV 258
            I +  RA +FLHH VRN+ G L  +G G       R  LE  +R   G TA P GLY +
Sbjct: 182 EIHVFARARSFLHHQVRNMVGTLALVGDGRWTADRLRAALEACDRSAAGPTAPPDGLYFL 241

Query: 259 QVEYPEAFALPKR 271
           +V +P   A P +
Sbjct: 242 RVRFPGETAAPAK 254