Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  422 bits (1086), Expect = e-122
 Identities = 285/813 (35%), Positives = 421/813 (51%), Gaps = 41/813 (5%)

Query: 301  IPSGMLYGSARAAQLHGLPPIPFHESFDAFFEGVPEHER----NSMRQAYRSLREGPAGN 356
            I   M++ +    Q  G      H+  + F+E +   +     +S+RQA R  R G    
Sbjct: 448  ISQRMIFSNHHLGQTLGYDRTELHQMGEYFWEILLHSDDADHYHSLRQAQR--RGGYTQL 505

Query: 357  YQITYRVQLENGTSRYIESRAR-LYRDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFA 415
             Q   R +  NG  R  + R + L RD      R+ G   D+T+Q+E  + L  SE+++ 
Sbjct: 506  LQCQLRFRHRNGKWRCFDIREQALARDRDNQVTRIIGVAKDVTEQIEASESLRDSEQRYR 565

Query: 416  SLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSS--------AQVLGRTAEEIGLWAES 467
             L +   D I  T         ++P+     G+++          ++    +  G+++  
Sbjct: 566  MLAESISDVIFSTDNKLS-LNYVSPSVQAVLGYTADWIFQNGWQSIIANPQQLTGIYSLM 624

Query: 468  VERAKRIEQVIREQALSNVA----VVLNHRNGDPLTCVISSRLITVDDQPCSVTTL---- 519
               +K +++  +   L N       + +    D     I  RL+ V D+  +   +    
Sbjct: 625  DRVSKALDKPDQLAELRNQMQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVG 684

Query: 520  RDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVI 579
            RDI+QQ+RAE  L+ +    A  F  S  AI IT+  +G  ++ N+ F R++GY+  +V+
Sbjct: 685  RDISQQRRAEKDLRMA----ATVFEHSTSAILITDP-AGYIVQANEAFSRVSGYAVSQVL 739

Query: 580  GHTVYEIGIWADDKQRSALLAELRERGRVHHR---EMLGRNKRGDILTVEVSVEPITLNE 636
                  + +   D+Q+ A L  + ++ + H     E+  + + G+     V +  +  +E
Sbjct: 740  DQLPNMLTV---DEQQEAHLRYVLKQLQQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDE 796

Query: 637  VDCLLLTA--RDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGA 694
             D         D+S+ K ++ +I  LAY+D LT+LPNR L  DRL   +    R      
Sbjct: 797  GDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSADRQKTWVV 856

Query: 695  LLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGS 754
            L+FLDLD FK INDSLGH  GD +LK +  RL   V  +DTVAR+GGDEF +LL     S
Sbjct: 857  LMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQP-RAS 915

Query: 755  REHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALY 814
            RE    +   +A+ +   L  P  L+G+   VT SIG+AL P  G   + L+K AD A+Y
Sbjct: 916  REMALNRAINVAEQILASLVRPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMY 975

Query: 815  RAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEV 874
             AK+ G+N  Q +   M  +A ERL +E+DLR AL + E  L++QPQ      R+ GAE 
Sbjct: 976  HAKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEA 1035

Query: 875  LLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCV 934
            LLRW HP+ G  PP  FI VLEE GL+++VG W++ EAC    ++ T          + V
Sbjct: 1036 LLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVITEAC---RQLRTWHQAKVRVPKVSV 1092

Query: 935  NISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSF 994
            NIS RQF       R+   L    LP   L LE+TE I+++ + + +  +  LK  G+S 
Sbjct: 1093 NISARQFSDGQLGTRIANILRSTGLPPACLELELTESILMREVSEAMQILAGLKNLGLSI 1152

Query: 995  AMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAE 1054
            A+DDFGTGYSSL YLK+ P+D LKID++FV   P    DA+I RAI+AMA SL+LAVIAE
Sbjct: 1153 AVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAE 1212

Query: 1055 GVELTEQLAFLERLGCHLYQGYLHSRPLPLPEF 1087
            GVE  EQL FL   GC   QGYL  RP+P   F
Sbjct: 1213 GVETHEQLDFLREHGCDEVQGYLFGRPMPANRF 1245



 Score = 49.3 bits (116), Expect = 2e-09
 Identities = 87/423 (20%), Positives = 167/423 (39%), Gaps = 50/423 (11%)

Query: 140 IREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQV 199
           I +IT ++  E +L+  E  ++ +    P+ + +       +   N H     G+  +++
Sbjct: 411 ISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYDRTEL 470

Query: 200 --IGKTSLELGLWVNPEQRHQIVESTRANGGP---LIMEVQFRATSGKVHDGILCTQGIE 254
             +G+   E+ L  +    +  +   +  GG    L  +++FR  +GK     +  Q + 
Sbjct: 471 HQMGEYFWEILLHSDDADHYHSLRQAQRRGGYTQLLQCQLRFRHRNGKWRCFDIREQALA 530

Query: 255 LEG---VTFLISTFVDTTERKRAEQALKDSQERLDLALDS-------------------- 291
            +    VT +I    D TE+  A ++L+DS++R  +  +S                    
Sbjct: 531 RDRDNQVTRIIGVAKDVTEQIEASESLRDSEQRYRMLAESISDVIFSTDNKLSLNYVSPS 590

Query: 292 --AQLG-TWDWHIPSGMLYGSARAAQLHGLPPIPFHESFDAFFEGVPEHERNSMRQAYRS 348
             A LG T DW   +G     A   QL G+  +    S            RN M+     
Sbjct: 591 VQAVLGYTADWIFQNGWQSIIANPQQLTGIYSLMDRVSKALDKPDQLAELRNQMQ----- 645

Query: 349 LREGPAGNYQITYRVQLENGTSRYIESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLS 408
                       +     +G    IE R  L  D+ G    + G   DI+ Q   E+ L 
Sbjct: 646 -------TQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLR 698

Query: 409 ASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESV 468
            +    A++F+ S   I +T    G  ++ N AF++  G++ +QVL +    + +  +  
Sbjct: 699 MA----ATVFEHSTSAILIT-DPAGYIVQANEAFSRVSGYAVSQVLDQLPNMLTVDEQQE 753

Query: 469 ERAKRIEQVIREQALSNVAVVLNHRNGD--PLTCVISSRLITVDDQPCSVTTLRDITQQQ 526
              + + + +++ +     V L  RNG+  P    I++ L    D    V    DI++++
Sbjct: 754 AHLRYVLKQLQQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERK 813

Query: 527 RAE 529
            +E
Sbjct: 814 ASE 816



 Score = 35.8 bits (81), Expect = 2e-05
 Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 8/156 (5%)

Query: 511 DQPCSVTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRL 570
           D    + ++ DIT ++  E +L   E  ++    + PD + + +  S R +  N    + 
Sbjct: 403 DHNAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQT 462

Query: 571 TGYSTDEV--IGHTVYEIGIWADDKQRSALLAELRERG---RVHHREMLGRNKRGDILTV 625
            GY   E+  +G   +EI + +DD      L + + RG   ++   ++  R++ G     
Sbjct: 463 LGYDRTELHQMGEYFWEILLHSDDADHYHSLRQAQRRGGYTQLLQCQLRFRHRNGKWRCF 522

Query: 626 EVSVEPITL---NEVDCLLLTARDVSQLKNAQAQIR 658
           ++  + +     N+V  ++  A+DV++   A   +R
Sbjct: 523 DIREQALARDRDNQVTRIIGVAKDVTEQIEASESLR 558