Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  361 bits (927), Expect = e-104
 Identities = 192/437 (43%), Positives = 274/437 (62%), Gaps = 7/437 (1%)

Query: 653  AQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGH 712
            A++++  LAY+D LT L NR+LL+ +LS  I   +  +  G L +LDLD FK INDSLGH
Sbjct: 234  AESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGH 293

Query: 713  PVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLREL 772
             +GD ++K +  R+EA  + +   AR+GGDEF VL+  L  +      K  E+A  L  L
Sbjct: 294  TIGDQLIKAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPA------KAEEVAKQLLTL 347

Query: 773  LAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQ 832
            ++ P ++D  +   T SIG+++ P  G+   D+L++AD ALYRAK SGRN    +   MQ
Sbjct: 348  ISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQ 407

Query: 833  KAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFI 892
                  L +E  L  AL + +L L +QPQVD + N I+G E L+RW+HP+ G  PP  F+
Sbjct: 408  AQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHN-IIGVEALIRWNHPKRGLLPPGVFM 466

Query: 893  QVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLR 952
             + EE+G IL +G+WI+++AC   A+    G++      L +NISP QF Q  F+ +V  
Sbjct: 467  PIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNH 526

Query: 953  SLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRL 1012
            +L    +  + + LEITE ++++N+E  I KM +LK   +S ++DDFGTGYSSL YLK L
Sbjct: 527  ALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHL 586

Query: 1013 PVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHL 1072
             VD LKID+SFV    +D ND  IV  I+A+AR L+L VIAEGVE T +LA L++LGC+ 
Sbjct: 587  AVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQ 646

Query: 1073 YQGYLHSRPLPLPEFRQ 1089
            +QGYL  +PL   E  Q
Sbjct: 647  FQGYLFDKPLRAEEIAQ 663