Pairwise Alignments
Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440
Subject, 917 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942
Score = 390 bits (1002), Expect = e-112
Identities = 251/733 (34%), Positives = 384/733 (52%), Gaps = 50/733 (6%)
Query: 369 TSRYIESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVT 428
+ R+ E L+ D+ G L + G + DIT++ + SE +F L + +P+ I V
Sbjct: 215 SDRWFECHCLLHHDETGELLSLVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVL 274
Query: 429 RQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVAV 488
+ G + N Q F S +++ G+ +GL NV V
Sbjct: 275 -DEQGAVLFANHVAEQVFDQSLSELQGKY---LGL-----------------PLTLNVTV 313
Query: 489 VLNHRNGDPLTCVISSRLITVDDQPCS--VTTLRDITQQQRAEAALKSSEEKFAKAFHSS 546
L+ D + ++ + Q + L DIT Q+ + LK +E A +S
Sbjct: 314 QLDLVQPDGSLRYVEVSIVPIPWQQSKAYLALLTDITSLQQTQQRLKLLQE----ATENS 369
Query: 547 PDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHT--VYEIGIWADDKQRSALLAELRE 604
P +I IT G VN F +TGY DEVIG + G+ + + L E
Sbjct: 370 PASILITSAE-GIIEYVNPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQD--LWETIT 426
Query: 605 RGRVHHREMLGRNKRGDILTVEVSVEPIT--LNEVDCLLLTARDVSQLKNAQAQIRHLAY 662
G E+ R K G++ S+ P+ ++ + D+++ K + + H A
Sbjct: 427 AGETWRGELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQAN 486
Query: 663 HDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKII 722
+D LT+LPNR+L +DRL Q AL +R N ++ LDLD FK+IND+LGH GD +L+ I
Sbjct: 487 YDSLTDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEI 546
Query: 723 TARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQ 782
RL + E T++RLGGDEF+++ ++ H+E+ L+ L +++++P++++ +
Sbjct: 547 AKRLRYHLPREITISRLGGDEFLIICPAVK-ENIHLEK----LSQQLLKIISQPITIEAE 601
Query: 783 RLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQKAASERLRME 842
L +T SIGVA P+ G TP L++ AD A+Y AK +G N QLF TM A R+++E
Sbjct: 602 ELVITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLE 661
Query: 843 NDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLIL 902
LR AL + +L + +QP + +DN +VG E L RWH P+LG PP +FI + EE+GLI+
Sbjct: 662 THLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLII 721
Query: 903 EVGSWILDEACDACARMLTDGLIDADDFN----LCVNISPRQFRQNDFVGRVLRSLDDYR 958
+G ++++AC D I +N + VN+SPRQ R N F + L +
Sbjct: 722 PLGYRVIEQACQ-------DVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHN 774
Query: 959 LPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALK 1018
L LE+TE +++ N + L R G++ A+DDFGTGYS+L+YL+R P +LK
Sbjct: 775 FRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLK 834
Query: 1019 IDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGYLH 1078
+DQSF+RD P +V+ IVAMA L + +AEGVE EQ+ FL+ +GC QGY
Sbjct: 835 VDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWF 894
Query: 1079 SRPLPLPEFRQML 1091
SRPLP E L
Sbjct: 895 SRPLPAVEIDSFL 907
Score = 41.2 bits (95), Expect = 4e-07
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 119 WLEINGSLTHDPHGRP-QMIGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRRR 177
W E + L HD G ++G IR+IT + + + +SE RF L +PN IL+ +
Sbjct: 218 WFECHCLLHHDETGELLSLVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVLDEQ 277
Query: 178 DGMIFEVNQHFEDMFGWPGSQVIGK 202
++F N E +F S++ GK
Sbjct: 278 GAVLF-ANHVAEQVFDQSLSELQGK 301
Score = 38.5 bits (88), Expect = 2e-06
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 113 PDGSLHWLEINGSLTHDPHGRPQM-IGVIREITRQRERETALINSEKRFATLFHLSPNAI 171
PDGSL ++E+ S+ P + + + ++ +IT ++ + L K SP +I
Sbjct: 320 PDGSLRYVEV--SIVPIPWQQSKAYLALLTDITSLQQTQQRL----KLLQEATENSPASI 373
Query: 172 LLTRRRDGMIFEVNQHFEDMFGWPGSQVIGKTSLELGLWVNPEQRHQIVESTRANGGPLI 231
L+T +G+I VN FE M G+ +VIGK L + +Q + T G
Sbjct: 374 LITSA-EGIIEYVNPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQDLWETITAGETWR 432
Query: 232 MEVQFRATSGKVH-DGILCTQGIELEG-VTFLISTFVDTTERKRAEQALKDSQERLDLAL 289
E+ R +G++ D + +L G + ++ D TE+KR + L D Q D
Sbjct: 433 GELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELL-DHQANYDSLT 491
Query: 290 D 290
D
Sbjct: 492 D 492