Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

 Score =  391 bits (1004), Expect = e-112
 Identities = 312/1046 (29%), Positives = 495/1046 (47%), Gaps = 74/1046 (7%)

Query: 79   DLLPEEDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRPQ--- 135
            D+LP E   R   + + V++     + +  +I  PDG+   L         P G  Q   
Sbjct: 62   DILPGEQADRIVSLDRIVLSTSEGHE-LEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKF 120

Query: 136  MIGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWP 195
            ++  I +IT  R  E  L  SE+ + +L  L P  +  T    G + EV   + ++ G  
Sbjct: 121  VVVTIVDITNLRRTEETLRASEEHYRSLVDLHPQ-VPWTADTAGEVLEVGPRWSELTGLG 179

Query: 196  GSQVIGKTSLELGLWVNPEQRHQIVESTR---ANGGPLIMEVQFRATSGKVH-DGILCTQ 251
              + +G    +    V+P+    + E  R   A+G P   E +    +G           
Sbjct: 180  EKETLGSGWAKA---VHPQDAGALQEEWRRSLASGAPFDCEYRLLTKTGDYRWFRARAAA 236

Query: 252  GIELEG-VTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSA 310
              + +G +        D  ER+RA   L++S+ R     D A +  W         + + 
Sbjct: 237  KRDADGKIVRWYGVLEDIDERRRAADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNR 296

Query: 311  RAAQLHGLPPIPFHESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQIT--YRVQLENG 368
               +  G       E+    F  V     +  +    +     AG   +   YR++  +G
Sbjct: 297  LWLETTGQT-----EAEALGFGWVDVIHPDDRQAVQETFFRATAGKEPVRSEYRLRRADG 351

Query: 369  TSRYIESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVT 428
            +  ++    +      G  L   G++LDIT++   E     ++    S+F  SPD + V 
Sbjct: 352  SWAWVIDVGQPRFSADGTFLGYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVL 411

Query: 429  RQDTGQFIEINPAFTQTFGWSS-AQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVA 487
              + G+ + +N A  + FG +  A V G+T + IG  A   ++ +   + +R    +   
Sbjct: 412  DME-GRPLLMNEAGRRIFGLNEGAPVTGQTWDSIGR-ASDADKVEAAWESVRRGKTARFE 469

Query: 488  VVLNHRNGDPLTC-VISSRLITVDDQPCSVTTL-RDITQQQRAEAALKSSE-------EK 538
            + +    G+     VIS+ +     +P  + ++ RDIT  +RA   +  ++       ++
Sbjct: 470  ISVRDAGGEERCMDVISAPITDHHGKPFRILSIWRDITDAKRASDEISRAQRHAEAAADQ 529

Query: 539  FAKAFHSSPDAITITERH-SGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRSA 597
             +    S+ D++ + +     RYL  N       G   DE +G   +++    ++   + 
Sbjct: 530  LSSVLESTMDSVMLLDADWRVRYLNENARKLLQVG---DEALGRVFWKLFPEEEEGSFAK 586

Query: 598  LLAELRERGRVH-----HREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARDVSQLKN 652
               E+ +R RV      H   LGR        VE +  P      D + +  RD+++ + 
Sbjct: 587  HCREVMDR-RVRSFFEDHLSSLGR-------WVEANASPTR----DGISIFCRDITERRR 634

Query: 653  A-------QAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKH 705
            A       Q Q+ H+A HD LT L NR    +   +  AL + ++ R A+L LDLD FK 
Sbjct: 635  AEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEE--ALNESNHARMAVLCLDLDGFKA 692

Query: 706  INDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVREL 765
            +ND+LGHP GD +L+ ++ RL  +VR  +TVARLGGDEF ++   L  SR+      + L
Sbjct: 693  VNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAII-QPLTESRDEAFRLAQRL 751

Query: 766  ADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQ 825
             DTL    +EP S++G    V  SIG+A  P+ GT+  +L+K ADIALY AK SGR T +
Sbjct: 752  IDTL----SEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSAKSSGRGTYK 807

Query: 826  LFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQ 885
            LF   M        +M+  +R ALA+GE  LH+QP V      +   E LLRW HP+ G 
Sbjct: 808  LFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPERGM 867

Query: 886  QPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQND 945
              PS+FI + EE+GLI+ +G WIL EAC   AR         +  ++ VN+SP QF+  +
Sbjct: 868  IAPSEFIPIAEETGLIVPIGEWILGEACRQAARW-------PERVSVAVNLSPVQFKHRN 920

Query: 946  FVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSS 1005
             V  V ++L   RL    L LEITE +++   E  +  + +L+R GV  AMDDFGTGYSS
Sbjct: 921  LVRAVAKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSS 980

Query: 1006 LTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFL 1065
            L YL+  P D +K+DQ+FVRD P       IV+A+  + +SL +    EGVE  +QLA +
Sbjct: 981  LGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVV 1040

Query: 1066 ERLGCHLYQGYLHSRPLPLPEFRQML 1091
            +  G +  QGYL SRPLP  E  +++
Sbjct: 1041 DSEGFNEVQGYLFSRPLPAAEISKLI 1066



 Score = 26.9 bits (58), Expect = 0.008
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 552 ITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEI 586
           I +  + R++ +ND  C L G   +++IG T ++I
Sbjct: 29  IIKDDASRFVFINDAACDLLGKDRNQLIGRTDHDI 63