Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 578 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  370 bits (950), Expect = e-106
 Identities = 219/557 (39%), Positives = 317/557 (56%), Gaps = 17/557 (3%)

Query: 541  KAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRSALLA 600
            KAF +S + I IT+   G  L VN  F  +TGYS+ +V+G T   +     D+     + 
Sbjct: 13   KAFDASGEGILITDPR-GVILAVNKKFEEITGYSSVDVLGQTPRILASGRHDEAFYRDMW 71

Query: 601  ELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNE--VDCLLLTARDVSQLKNAQAQIR 658
            +L     +    +  R + GD    + S+  +   +  V+  +   RD++  K  + +I+
Sbjct: 72   DLVMEQGLWSGLIWNRRRTGDEYLEQFSISAVYARDGTVEGYIGVMRDITDQKLQEDRIK 131

Query: 659  HLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTV 718
            +LA HD LT L NR  L  RL + I   KR   R AL+FLDLD FK IND LGH VGD +
Sbjct: 132  YLASHDVLTGLLNRHALDTRLERAILHAKRRQARLALMFLDLDRFKQINDILGHDVGDEL 191

Query: 719  LKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEPMS 778
            LK +  RL   VR EDT+AR GGDEF++LL  LE ++  +    + + D+    LA+   
Sbjct: 192  LKTVAQRLRECVREEDTIARQGGDEFILLLEDLEDNKGSIAHTAQRIIDS----LAKDFE 247

Query: 779  LDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQKAASER 838
            + G  L  + SIG+AL P++G T A+L+K AD+A+Y AK SGR   Q F+  +     + 
Sbjct: 248  IMGCALSASASIGIALYPENGHTQAELVKHADLAMYHAKASGRGNFQFFNAELDAQVRQN 307

Query: 839  LRMENDLRLALARG--ELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQVLE 896
            + +E+DLR A+A G  +  LH+QP+++    R+V  E L+RWHHPQLG  PP++FI + E
Sbjct: 308  VALESDLRAAIAAGGQQFVLHYQPKINLATGRVVSLEALIRWHHPQLGMVPPAEFITLAE 367

Query: 897  ESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRSLDD 956
            +  LI  +  W++ E      R   D L       + +NISP QFRQ +FV  +L     
Sbjct: 368  DVHLITPLSRWLVGEVAAQITRWGDDAL------PVAINISPAQFRQANFVEELLEITGS 421

Query: 957  YRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDA 1016
            + +P  M+ LEITEG+ I ++E+ I  +   +  G   A+DDFGTGYSSL YL  LP+D 
Sbjct: 422  HGVPPGMIELEITEGVFINDMENAIKTLQAARDTGFRVALDDFGTGYSSLRYLVSLPIDV 481

Query: 1017 LKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGY 1076
            LKID+SFV D   +     IVR +V + + L + ++AEGVE  EQ  +L + GC + QGY
Sbjct: 482  LKIDRSFVSDQ--NQVCMAIVRFLVNLGQELGVEIVAEGVETLEQAHYLYKAGCTVGQGY 539

Query: 1077 LHSRPLPLPEFRQMLLE 1093
            L SRPLP+ +    L E
Sbjct: 540  LFSRPLPVADVLPFLRE 556



 Score = 35.8 bits (81), Expect = 9e-06
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 6/135 (4%)

Query: 401 VEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEE 460
           ++ +++L A + K    F  S + I +T    G  + +N  F +  G+SS  VLG+T   
Sbjct: 1   MDNKEQLQALKGK---AFDASGEGILIT-DPRGVILAVNKKFEEITGYSSVDVLGQTPRI 56

Query: 461 IGLWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVDDQPCS--VTT 518
           +          + +  ++ EQ L +  +    R GD      S   +   D      +  
Sbjct: 57  LASGRHDEAFYRDMWDLVMEQGLWSGLIWNRRRTGDEYLEQFSISAVYARDGTVEGYIGV 116

Query: 519 LRDITQQQRAEAALK 533
           +RDIT Q+  E  +K
Sbjct: 117 MRDITDQKLQEDRIK 131



 Score = 29.6 bits (65), Expect = 7e-04
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 164 FHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQVIGKT 203
           F  S   IL+T  R G+I  VN+ FE++ G+    V+G+T
Sbjct: 15  FDASGEGILITDPR-GVILAVNKKFEEITGYSSVDVLGQT 53