Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  399 bits (1024), Expect = e-115
 Identities = 242/583 (41%), Positives = 336/583 (57%), Gaps = 26/583 (4%)

Query: 516  VTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYST 575
            +  + D T+++RAE  L+    + ++A   SP  I IT+ + G    VN  F R TGYS 
Sbjct: 306  IAIVEDATERKRAELQLR----QLSRAVEQSPATIVITDTN-GVIEYVNPKFTRTTGYSA 360

Query: 576  DEVIG--HTVYEIG---IWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVE 630
            +E +G   +V + G   +    +  S + +  +  G  H+R      + G++     ++ 
Sbjct: 361  EEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFHNRR-----RNGELYWEHATIS 415

Query: 631  PITLNE--VDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKR 688
            PIT +   +   +    D+++ +  + +I  LAY D LT LPNR LL DR+SQ +A  +R
Sbjct: 416  PITDDNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQCLAAAER 475

Query: 689  HNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLL 748
                 ALLF+DLD+FK +NDSLGH  GD +L+ +  RL+  VR  DTV+RLGGDEFVV+L
Sbjct: 476  EQETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGDEFVVVL 535

Query: 749  SGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKR 808
            +  +   +   +  R++ D +     +P  +DG +L VTPSIG++L P        LLK 
Sbjct: 536  A--DAQLDGASQVARKIIDRV----GQPFVIDGHQLTVTPSIGISLFPHDARDFQSLLKN 589

Query: 809  ADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNR 868
            AD A+Y+AK+SGRN  Q F   M   A ERL +EN LR A+ R E  LH+QPQVD    R
Sbjct: 590  ADTAMYQAKESGRNAYQFFTAEMNVLAFERLVLENALRQAVERQEFVLHYQPQVDMGSGR 649

Query: 869  IVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDAD 928
            ++GAE L+RW HP+LG  PP++FI V E+SGLI  +G W+L EAC         GL    
Sbjct: 650  VIGAEALVRWLHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGL---P 706

Query: 929  DFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELK 988
               + VN+S  Q RQ++    V   L    L  + L LE+TE  V+++ E T+  +  L 
Sbjct: 707  AIPVAVNLSAVQLRQSELHESVAELLRRTGLESRYLELELTERTVMEDAEATVRCLRRLD 766

Query: 989  RYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLD 1048
              GV  ++DDFGTGYSSL+YLKR P+D LKIDQSFVRD   D +D  I  AI++M  SL 
Sbjct: 767  EMGVMLSIDDFGTGYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQAIAVAIISMGHSLR 826

Query: 1049 LAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPEFRQML 1091
            L VIAEGVE  EQL  L R GC   QG+   RP+P  EF   L
Sbjct: 827  LRVIAEGVETAEQLEILHRHGCDEAQGFHFGRPMPADEFAAYL 869



 Score = 42.7 bits (99), Expect = 1e-07
 Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 16/272 (5%)

Query: 261 LISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPP 320
           L+S  ++    ++++  L   +ER    L+    G   +     + Y + + A + G+P 
Sbjct: 183 LVSLALEHAALRQSQAQLHSLEERYLRLLEFCPTGIIHYDTELHITYSNQQFANIIGVP- 241

Query: 321 IPFHESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLY 380
           +   +  D     + + +      A  ++ EG  G ++  YR  L +G   ++   A   
Sbjct: 242 LERLQDLD-----MAKLQDQRPLPALAAVLEGRTGRFEGEYRASL-SGRQLWVSLVAAPV 295

Query: 381 RDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIE-IN 439
            D  G   ++ G +  + D  ER+ R      + +   + SP  I +T  DT   IE +N
Sbjct: 296 LDQGG---QLLGGIAIVEDATERK-RAELQLRQLSRAVEQSPATIVIT--DTNGVIEYVN 349

Query: 440 PAFTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLT 499
           P FT+T G+S+ + +G     +      +E  + +   I              RNG+   
Sbjct: 350 PKFTRTTGYSAEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFHNRRRNGELYW 409

Query: 500 CVISSRLITVDDQPCS--VTTLRDITQQQRAE 529
              +   IT D+Q  +  V    DIT+++R E
Sbjct: 410 EHATISPITDDNQRITHFVAVKEDITEKRRQE 441