Pairwise Alignments

Query, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  349 bits (896), Expect = e-100
 Identities = 222/579 (38%), Positives = 312/579 (53%), Gaps = 22/579 (3%)

Query: 511  DQPCSVTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRL 570
            DQ   V + RDI++ ++AEA L  +    A+ F S  +A+ +T+   GR   VN  F  +
Sbjct: 390  DQAGYVASFRDISEIKQAEARLHLA----ARVFDSLGEAMVVTDAR-GRIQSVNPAFSEV 444

Query: 571  TGYSTDEVIGHTVYEIGIWADDKQRSALLAE----LRERGRVHHREMLGRNKRGDILTVE 626
            TGYS  +  G     I   A  +   A  A+    L+E+G+    E++ R K G+     
Sbjct: 445  TGYSEADARGRAPGHI--LASGQHDPAFYAQMWQSLQEQGK-WQGEVINRRKSGETYPEW 501

Query: 627  VSVEPIT--LNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIA 684
            +S+  I     +V   +    D++  K A+A I HLAYHDPLT LPNR L  DRL   + 
Sbjct: 502  LSITAIKDGAGQVSQYVGLFTDITDRKQAEAHIHHLAYHDPLTGLPNRRLFYDRLENALR 561

Query: 685  LLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEF 744
               R   + A+L LDLD FK +ND+LGH  GD +LK + ARL   +R  DT+ARLGGDEF
Sbjct: 562  QAHRSRRKLAVLLLDLDRFKAVNDTLGHDQGDLLLKEVGARLSLCLREGDTLARLGGDEF 621

Query: 745  VVLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPAD 804
            V+LL  +  +     E    +A  L     +P+ L  + +  + SIG+AL P  G     
Sbjct: 622  VLLLPEVLSA-----EDASIVAGKLLAQFDQPVRLGEREIFASTSIGIALYPADGEDGES 676

Query: 805  LLKRADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDA 864
            LLK AD+A+Y AKD GR   + F  +  + + ERL +ENDLR A+   +L L++QPQ+ A
Sbjct: 677  LLKHADVAMYAAKDGGRAAYRFFIASHNERSLERLELENDLRRAVEGEQLLLYYQPQIGA 736

Query: 865  RDNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGL 924
               RI G E L+RW HP  G   P  FI + E +GLI  +G W L  AC         G+
Sbjct: 737  SSGRIAGVEALVRWRHPTRGLVMPDSFIALAENAGLIDAIGHWCLVAACRQLRAWQEQGV 796

Query: 925  IDADDFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKM 984
                   + VN+S RQ R+ DF   VL+ +    +    L LE+TE  +  + E  ++  
Sbjct: 797  PVP---RVAVNVSARQLRRWDFAQEVLQVVTQSGIDPAGLELELTESSLADDPEQILAIF 853

Query: 985  CELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMA 1044
              L++ GV  ++DDFGTGYSSL+YL R PVD +KID+SFV     D     +VRA++ +A
Sbjct: 854  STLRQAGVRVSIDDFGTGYSSLSYLSRYPVDEVKIDRSFVSRLLDDREARSVVRAVILLA 913

Query: 1045 RSLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLP 1083
              L +  +AEGVE   Q   L  L C   QGYL S+P+P
Sbjct: 914  HGLGMRTVAEGVETEAQWQVLSDLDCDELQGYLFSKPVP 952



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 396 DITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLG 455
           DI++  + E RL  +   F SL +       V     G+   +NPAF++  G+S A   G
Sbjct: 400 DISEIKQAEARLHLAARVFDSLGEAM-----VVTDARGRIQSVNPAFSEVTGYSEADARG 454

Query: 456 RTAEEIGLWAESVERA--KRIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVDDQP 513
           R    I L +   + A   ++ Q ++EQ      V+   ++G+     +S   I      
Sbjct: 455 RAPGHI-LASGQHDPAFYAQMWQSLQEQGKWQGEVINRRKSGETYPEWLSITAIKDGAGQ 513

Query: 514 CS--VTTLRDITQQQRAEA 530
            S  V    DIT +++AEA
Sbjct: 514 VSQYVGLFTDITDRKQAEA 532