Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

Subject, 334 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 from Synechococcus elongatus PCC 7942

 Score =  132 bits (331), Expect = 2e-35
 Identities = 79/197 (40%), Positives = 107/197 (54%), Gaps = 4/197 (2%)

Query: 64  PMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPELLHAIV 123
           P+  QL G  P  LA  A  A   GA  IDLN GCP   V + RGG+ LL+EPEL  AIV
Sbjct: 81  PIGAQLFGDQPATLAAAAQQAEAAGAVCIDLNMGCPVSKVTRKRGGSALLREPELAIAIV 140

Query: 124 REVRRAVPANIPVTSKMRLGFDSPDGALECATALAEGGSAHLVVHARTKVEGYKPPAHWE 183
           + V  AV  +IPVT K RLG++     L+ A  L   G+  L +H R++ +GY   A W 
Sbjct: 141 QAVAAAV--SIPVTVKTRLGWEQVT-ILDFAQQLEAAGAQLLTLHGRSRSQGYSGQADWN 197

Query: 184 WVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDL-GLQIAAARDG 242
           W+ RV+  + +PV ANG+I +  D   C + +GA+ +M GRG +  P L G    + + G
Sbjct: 198 WITRVKSRLSIPVIANGDINSPADAIACLQQTGADGVMCGRGSLGNPGLVGAIDRSLKTG 257

Query: 243 RDYQPMSWHDLLPLLRE 259
                +   D L L RE
Sbjct: 258 EQTPELELRDRLQLARE 274