Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

Subject, 362 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  122 bits (306), Expect = 1e-32
 Identities = 85/239 (35%), Positives = 119/239 (49%), Gaps = 8/239 (3%)

Query: 3   IALAPMEGLVDNILRDVLTRVG-GIDWCVTEFIRVCDRLLPASSFDKLAPELRQGARTAA 61
           I LAPM G+ D+  R +    G  + W  TE   V  R L       + P L  GA    
Sbjct: 14  IMLAPMAGVTDSPFRRLAHDYGCPLSW--TEM--VASRELLRERARGVDPRLGGGAEAGR 69

Query: 62  GVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPELLHA 121
             P  VQL G DP+ +AE A      GA +ID+N GCP + V    GG+ L+++  L   
Sbjct: 70  AGPFAVQLAGCDPLIMAEAARRVEGAGAELIDINMGCPVRKVVGGLGGSALMRDLPLAAR 129

Query: 122 IVREVRRAVPANIPVTSKMRLGFDSPD-GALECATALAEGGSAHLVVHARTKVEGYKPPA 180
           I+  V  AV   +PV+ KMRLG+D     A+E A      G + L VH RT+ + Y   A
Sbjct: 130 ILEAVVGAV--TLPVSLKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYDGRA 187

Query: 181 HWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQIAAA 239
            W  +  V+  V +PV ANG++  + + R    V+GA+ +M+GR  +  P L   IA A
Sbjct: 188 DWPAIGLVKRAVSLPVIANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLPGAIARA 246