Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

Subject, 322 a.a., nifR3 family TIM-barrel protein (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (310), Expect = 4e-33
 Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 14/238 (5%)

Query: 2   QIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVCDRLLPAS-SFDKLAPELRQGARTA 60
           Q+ +APM G+ D   R++  R G     V+E +     +     S  ++A     G R+ 
Sbjct: 11  QLIVAPMAGVTDQPFRNLCLRYGAA-LAVSEMLSSNPEVWDTDKSRQRMAHAGEDGIRS- 68

Query: 61  AGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPELLH 120
                 VQ+ G+DP  +A  A +  + GA +ID+N GCPAK VNK   G+ LL++PEL+ 
Sbjct: 69  ------VQIAGADPDMMAHAALVNVQQGAQIIDINMGCPAKKVNKKLAGSALLQQPELVK 122

Query: 121 AIVREVRRAVPANIPVTSKMRLGFDSPD--GALECATALAEGGSAHLVVHARTKVEGYKP 178
           AI++ V  AV  ++PVT K+R G+ +P+    +  A    + G A L VH RT+   YK 
Sbjct: 123 AILQAVVAAV--DVPVTLKIRTGW-APEHRNGVHIAQIAQDCGIASLAVHGRTRQCMYKG 179

Query: 179 PAHWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQI 236
            A ++ +  ++  V +PV ANG+I T +  R   + +GA+ +M+GRG   RP L  +I
Sbjct: 180 DAEYDTIRAIKQNVSIPVVANGDICTPEKARSVLDYTGADAVMIGRGAQGRPWLFREI 237