Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

Subject, 419 a.a., dihydrouridine synthase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 87/300 (29%), Positives = 127/300 (42%), Gaps = 27/300 (9%)

Query: 5   LAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVCDRLLPASSFDKLAPELRQG-ARTAAGV 63
           LAP+ G  D   R +L R  G   C TE +        A      +P  R   A T    
Sbjct: 14  LAPLAGYSDLSFR-LLCREAGAAVCCTEMVS-------AKGLIYCSPGTRDLLATTPEDA 65

Query: 64  PMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPELLHAIV 123
           P+ VQL G DP  +        E G    DLN GC    V K+  GA +L++     A+ 
Sbjct: 66  PLVVQLFGCDPDIMVRAMEPLLEQGFRWFDLNMGCSVPKVVKTGCGAAMLRDVPQALAVA 125

Query: 124 REVRRAVPANIPVTSKMRLGFD-SPDGALECATALAEGGSAHLVVHARTKVEGYKPPAHW 182
           R + R   A   V  K RLG+D   +   +   ALA+ G+  + +H R   +G+   A W
Sbjct: 126 RAMLRTAGAG-RVGFKFRLGWDVGQEVWADLGRALADLGAGWVTLHPRYARQGFSGEARW 184

Query: 183 EWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDL---GLQIAAA 239
             +  +   V VPV A+G+++T  D  RC   +G   +M  RG ++ P +     +  A 
Sbjct: 185 SALGELVRAVSVPVIASGDLFTAADGVRCLRETGVASVMYARGALNDPGVFHAHRERVAG 244

Query: 240 RDGRDYQPMSWHDLLPLLREFWRQAQAKLSPRYAPGR-----MKQWLAMLTRSYPEAVVL 294
           R    Y P     L+           A+L+ +YAPGR     M+ ++    R  P A  L
Sbjct: 245 RPDPGYTPQRLRALI--------TRHAELARQYAPGRSALLKMRTFVPRYVRHLPGARAL 296