Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

Subject, 332 a.a., dihydrouridine synthase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 88/316 (27%), Positives = 135/316 (42%), Gaps = 25/316 (7%)

Query: 5   LAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVCD-RLLP------ASSFDKLAPELRQGA 57
           LAP+ G+     R+V+  +GG   C   F  +C+ R +P      +++F   A EL +  
Sbjct: 14  LAPLAGVGHVAFREVIDNLGG---CGLLFTGMCNARAVPTENPARSNAFTWRAEELERCV 70

Query: 58  RTAAGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPE 117
                     QL G+DP  +AE A      G   +D+N GC    + +   GA LL++ E
Sbjct: 71  ---------CQLFGADPSEMAEAARRVEAEGFFGVDINMGCSVAAIVRRGCGADLLRDEE 121

Query: 118 LLHAIVREVRRAVPANIPVTSKMRLGFD-SPDGALECATALAEGGSAHLVVHARTKVEGY 176
               +V  VRRAV  + PV  K R G+   P GA+  A    + G+  LV H R   +  
Sbjct: 122 RAVRMVESVRRAV--DCPVLVKFRTGWSPDPQGAVALARRFEDAGADALVFHPRVAPDRR 179

Query: 177 KPPAHWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRP-DLGLQ 235
             P     +  V++ V +PV  NGE++T  D     E +G + I LGR  + RP      
Sbjct: 180 TRPPLRHHIRLVKEAVAIPVLGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFAAW 239

Query: 236 IAAARDGRDYQPMSWHDLLPLLREFWRQAQAKLSPRYAPGRMKQWLAMLTRSYPEAVVLF 295
                D     P  W D+   L +   +  A    +YA    K++L     ++     L 
Sbjct: 240 TGLVDDNPASNPDLWRDIPLALLDALERRHA--DRKYAARLFKKFLLYFIANFTYGNSLR 297

Query: 296 AELRREDDCARISRLL 311
             + + DD A +   L
Sbjct: 298 GPMLKGDDPADLRTAL 313